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scnpilot_solids1_trim150_scaffold_1100_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1100_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..678)
DNA (678bp) protein (226aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYH7_9GAMM
putative Rossmann fold nucleotide-binding protein
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:AGG90001.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(830..4150)
DNA (3321bp) protein (1107aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90002.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1100_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4505..6217)
DNA (1713bp) protein (571aa)
Putative hemolysin n=1 Tax=Rhodanobacter denitrificans RepID=I4WYH5_9GAMM
Putative hemolysin {ECO:0000313|EMBL:AGG90003.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative hemolysin
scnpilot_solids1_trim150_scaffold_1100_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6314..6925)
DNA (612bp) protein (204aa)
Multiple antibiotic transporter n=2 Tax=Rhodanobacter denitrificans RepID=M4NGJ6_9GAMM
multiple antibiotic transporter
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6974..7744)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGF1_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90005.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7741..8064)
DNA (324bp) protein (108aa)
Glutaredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WYH2_9GAMM
monothiol glutaredoxin, Grx4 family
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8179..8757
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Superoxide dismutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR0_9GAMM
superoxide dismutase
scnpilot_solids1_trim150_scaffold_1100_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8865..10025)
DNA (1161bp) protein (387aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NK22_9GAMM
5-(carboxyamino)imidazole ribonucleotide synthase
scnpilot_solids1_trim150_scaffold_1100_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10022..10525)
DNA (504bp) protein (168aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG9_9GAMM
5-(carboxyamino)imidazole ribonucleotide mutase
scnpilot_solids1_trim150_scaffold_1100_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10584..10853
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1100_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10979..13225
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90011.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Protein of unknown function (DUF1631)
scnpilot_solids1_trim150_scaffold_1100_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13222..14079
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:AGG90012.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AGG90012.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV8_9GAMM
scnpilot_solids1_trim150_scaffold_1100_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14123..14521
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBN6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96877.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3301)
scnpilot_solids1_trim150_scaffold_1100_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14567..15022)
DNA (456bp) protein (152aa)
Stringent starvation protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NGK4_9GAMM
stringent starvation protein B
Stringent starvation protein B {ECO:0000313|EMBL:AGG90014.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15009..15647)
DNA (639bp) protein (213aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG3_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG90015.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15721..16479)
DNA (759bp) protein (253aa)
Cytochrome c1 n=2 Tax=Rhodanobacter denitrificans RepID=M4NR18_9GAMM
cytochrome c1
Cytochrome c1 {ECO:0000313|EMBL:AGG90016.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1100_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..17359)
DNA (888bp) protein (296aa)
Cytochrome b n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG1_9GAMM
cytochrome b subunit of the bc complex
Cytochrome b {ECO:0000256|RuleBase:RU003385}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 17 items

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