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scnpilot_solids1_trim150_scaffold_1597_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1597_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1856
DNA (1854bp) protein (618aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AGG90263.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AGG90263.1};; EC=4.1.1.20 {ECO:0000313|EMBL:AGG90263.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
aspartate kinase (EC:4.1.1.20 2.7.2.4)
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ5_9GAMM
scnpilot_solids1_trim150_scaffold_1597_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1944..2348
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90262.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1597_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2345..3733
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRT9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90261.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1597_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3839..5227
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS94_9GAMM
scnpilot_solids1_trim150_scaffold_1597_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5386..5961
DNA (576bp) protein (192aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS96_9GAMM
Type 11 methyltransferase {ECO:0000313|EMBL:EIM02338.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
type 11 methyltransferase
scnpilot_solids1_trim150_scaffold_1597_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6673..8724)
DNA (2052bp) protein (684aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP1_9GAMM
Putative metalloendopeptidase {ECO:0000313|EMBL:AGG90258.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative metalloendopeptidase
scnpilot_solids1_trim150_scaffold_1597_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8814..12563)
DNA (3750bp) protein (1250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJH6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1597_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12776..14548)
DNA (1773bp) protein (591aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH26_9GAMM
Outer membrane protein {ECO:0000313|EMBL:AGG90255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane protein
scnpilot_solids1_trim150_scaffold_1597_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14691..15125)
DNA (435bp) protein (145aa)
Exo-beta-1,3-glucanase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH73_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG90254.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 9 items

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