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scnpilot_solids1_trim150_scaffold_1030_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1030_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..460
DNA (459bp) protein (153aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN6_9GAMM
molecular chaperone of HSP90 family
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(536..1105)
DNA (570bp) protein (190aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:AGG89732.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AGG89732.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY85_9GAMM
scnpilot_solids1_trim150_scaffold_1030_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1309..1932
DNA (624bp) protein (208aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUE1_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIM03083.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PAP2 superfamily protein
scnpilot_solids1_trim150_scaffold_1030_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1951..2535)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUE2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03084.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1030_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2891..5119
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUE3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03085.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TIR-like domain-containing protein (DUF1863)
scnpilot_solids1_trim150_scaffold_1030_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5186..5584
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY89_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89728.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5623..5784
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHZ6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89727.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5928..7613
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ27_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG89726.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1030_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..8233)
DNA (588bp) protein (196aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Rhodanobacter denitrificans RepID=M4NFM8_9GAMM
nicotinamide mononucleotide transporter PnuC
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:AGG89725.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8244..10424)
DNA (2181bp) protein (727aa)
TonB-dependent siderophore receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NFR8_9GAMM
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AGG89724.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
TonB-dependent siderophore receptor
scnpilot_solids1_trim150_scaffold_1030_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10608..11744)
DNA (1137bp) protein (379aa)
Aminoglycoside phosphotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY93_9GAMM
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EIM03090.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative homoserine kinase type II (protein kinase fold)
scnpilot_solids1_trim150_scaffold_1030_curated_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11876..12778
DNA (903bp) protein (301aa)
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WY94_9GAMM
putative permease
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1030_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12850..13434
DNA (585bp) protein (195aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ21_9GAMM
response regulator containing a CheY-like receiver domain and a GGDEF domain
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:AGG89721.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..13864
DNA (399bp) protein (133aa)
Heat shock protein 15 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF1_9GAMM
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribosome-associated heat shock protein implicated in recycling of 50S subunit
scnpilot_solids1_trim150_scaffold_1030_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13958..14599
DNA (642bp) protein (214aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY97_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG89719.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14609..16051)
DNA (1443bp) protein (481aa)
Catalase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF3_9GAMM
Catalase {ECO:0000313|EMBL:EIM03095.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
catalase
scnpilot_solids1_trim150_scaffold_1030_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16240..18816)
DNA (2577bp) protein (859aa)
DNA mismatch repair protein MutS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W449_9GAMM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA mismatch repair protein MutS
scnpilot_solids1_trim150_scaffold_1030_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18907..19416
DNA (510bp) protein (170aa)
Competence/damage-inducible protein CinA-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ15_9GAMM
competence/damage-inducible protein CinA-like protein
Competence/damage-inducible protein CinA-like protein {ECO:0000313|EMBL:AGG89716.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1030_curated_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19562..20155
DNA (594bp) protein (198aa)
Protein RecA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUG4_9GAMM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein RecA
Displaying 19 items

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