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scnpilot_solids1_trim150_scaffold_851_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_851_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(144..494)
DNA (351bp) protein (117aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NB12_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG87790.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..856)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ07_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87791.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1007..2404)
DNA (1398bp) protein (466aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND65_9GAMM
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AGG87792.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2714..3280
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Rhodanobacter denitrificans RepID=I4WSS9_9GAMM
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3350..6274)
DNA (2925bp) protein (975aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter denitrificans RepID=M4NB48_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:AGG87794.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_851_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6455..8584)
DNA (2130bp) protein (710aa)
Elongation factor G n=1 Tax=Rhodanobacter denitrificans RepID=M4NB16_9GAMM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
translation elongation factor EF-G
scnpilot_solids1_trim150_scaffold_851_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8681..9343)
DNA (663bp) protein (221aa)
(Fe-S)-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSS6_9GAMM
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AGG87796.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9358..9720)
DNA (363bp) protein (121aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSS5_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG87797.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..10483)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPX1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_851_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10594..11607)
DNA (1014bp) protein (338aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPX0_9GAMM
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EIM01512.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cysteine synthase
scnpilot_solids1_trim150_scaffold_851_curated_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11678..12313)
DNA (636bp) protein (212aa)
Peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXA4_9GAMM
Peroxidase {ECO:0000313|EMBL:EIL91845.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
lsfA; peroxidase
scnpilot_solids1_trim150_scaffold_851_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..13686
DNA (1023bp) protein (341aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
homoserine acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW9_9GAMM
scnpilot_solids1_trim150_scaffold_851_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13726..14913
DNA (1188bp) protein (396aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:AGG87801.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AGG87801.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT24_9GAMM
scnpilot_solids1_trim150_scaffold_851_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14910..15983
DNA (1074bp) protein (358aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Homoserine dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND74_9GAMM
scnpilot_solids1_trim150_scaffold_851_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16092..16700)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01506.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_851_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16916..18499
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01505.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_851_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18554..20218)
DNA (1665bp) protein (555aa)
Amino acid transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW2_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIM01504.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amino acid transporter
scnpilot_solids1_trim150_scaffold_851_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20461..23406)
DNA (2946bp) protein (982aa)
DNA/RNA helicase, superfamily II n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ24_9GAMM
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGG87806.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA/RNA helicase, superfamily II
scnpilot_solids1_trim150_scaffold_851_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23403..25355)
DNA (1953bp) protein (651aa)
Adenine specific DNA methylase Mod n=1 Tax=Rhodanobacter denitrificans RepID=M4NB60_9GAMM
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:AGG87809.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
adenine specific DNA methylase Mod
scnpilot_solids1_trim150_scaffold_851_curated_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25433..25879
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT80_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_851_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25990..27372)
DNA (1383bp) protein (461aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:AGG87811.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AGG87811.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
L-serine dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT79_9GAMM
scnpilot_solids1_trim150_scaffold_851_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27451..27693
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT78_9GAMM
Glutaredoxin-like domain (DUF836)
Glutaredoxin-like domain (DUF836) {ECO:0000313|EMBL:AGG87812.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_851_curated_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27756..29123)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPV5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01497.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein of unknown function (DUF697)/GTPase of unknown function
scnpilot_solids1_trim150_scaffold_851_curated_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29133..29678)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPV4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01496.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_851_curated_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29675..30256)
DNA (582bp) protein (194aa)
Cytochrome B561 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPV3_9GAMM
Cytochrome B561 {ECO:0000313|EMBL:EIM01495.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome B561
scnpilot_solids1_trim150_scaffold_851_curated_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30253..30873)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT74_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01494.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_851_curated_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31661..32404)
DNA (744bp) protein (248aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT73_9GAMM
geranylgeranyl pyrophosphate synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 27 items

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