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scnpilot_solids1_trim150_scaffold_749_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_749_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1734)
DNA (1734bp) protein (578aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Rhodanobacter denitrificans RepID=I4WW98_9GAMM
pyruvate dehydrogenase E1 component, homodimeric type
scnpilot_solids1_trim150_scaffold_749_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1916..4207)
DNA (2292bp) protein (764aa)
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:EIL97703.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EIL97703.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE12_9GAMM
malic enzyme
scnpilot_solids1_trim150_scaffold_749_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4320..5603)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90548.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5748..6803)
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE14_9GAMM
ribosome small subunit-dependent GTPase A
scnpilot_solids1_trim150_scaffold_749_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..8210
DNA (1263bp) protein (421aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EIL97706.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EIL97706.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Aminotransferase AlaT n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE15_9GAMM
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids1_trim150_scaffold_749_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8215..8814
DNA (600bp) protein (200aa)
Lysophospholipase L1-like esterase n=1 Tax=Rhodanobacter denitrificans RepID=M4NSS9_9GAMM
lysophospholipase L1-like esterase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:AGG90551.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9125..10048
DNA (924bp) protein (308aa)
Glutaredoxin-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE18_9GAMM
Glutaredoxin-like protein {ECO:0000313|EMBL:EIL97709.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
monothiol glutaredoxin, Grx4 family
scnpilot_solids1_trim150_scaffold_749_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10125..11450)
DNA (1326bp) protein (442aa)
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI38_9GAMM
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase
Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase {ECO:0000313|EMBL:AGG90554.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11569..13146
DNA (1578bp) protein (526aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE20_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL97711.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tetratricopeptide repeat protein,sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_749_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..14713
DNA (1548bp) protein (516aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NST4_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG90556.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14717..16546)
DNA (1830bp) protein (610aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKF8_9GAMM
Sulfotransferase family protein {ECO:0000313|EMBL:AGG90557.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_749_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16630..19608)
DNA (2979bp) protein (993aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane cobalamin receptor protein
scnpilot_solids1_trim150_scaffold_749_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20041..20832)
DNA (792bp) protein (264aa)
AMP nucleosidase {ECO:0000313|EMBL:EIL97715.1}; EC=3.2.2.4 {ECO:0000313|EMBL:EIL97715.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
AMP nucleosidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE24_9GAMM
AMP nucleosidase, putative
scnpilot_solids1_trim150_scaffold_749_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21055..21999
DNA (945bp) protein (315aa)
EDD domain protein, DegV family n=2 Tax=Rhodanobacter denitrificans RepID=M4NHZ5_9GAMM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:AGG90560.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22010..22792)
DNA (783bp) protein (261aa)
Tropinone reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90561.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..23089
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE27_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97718.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_749_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23111..24988)
DNA (1878bp) protein (626aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide peptidase {ECO:0000256|PIRNR:PIRNR001217}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal peptide peptidase SppA, 67K type n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB5_9GAMM
signal peptide peptidase SppA, 67K type
scnpilot_solids1_trim150_scaffold_749_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25025..26410)
DNA (1386bp) protein (462aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter denitrificans RepID=M4NI45_9GAMM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:AGG90564.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26517..27719
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHZ9_9GAMM
Protein of unknown function (DUF3667)
Uncharacterized protein {ECO:0000313|EMBL:AGG90565.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28121..30295
DNA (2175bp) protein (725aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Primosome assembly protein PriA n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB8_9GAMM
replication restart DNA helicase PriA
scnpilot_solids1_trim150_scaffold_749_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30302..31060)
DNA (759bp) protein (253aa)
Sec-independent protein translocase protein TatC n=1 Tax=Rhodanobacter denitrificans RepID=M4NKG7_9GAMM
twin arginine targeting protein translocase subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31047..31496)
DNA (450bp) protein (150aa)
Sec-independent protein translocase protein TatB n=2 Tax=Rhodanobacter denitrificans RepID=M4NLN7_9GAMM
twin arginine-targeting protein translocase TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31523..31762)
DNA (240bp) protein (80aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VTR2_9GAMM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
twin arginine-targeting protein translocase, TatA/E family
scnpilot_solids1_trim150_scaffold_749_curated_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31826..32515)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NI04_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_749_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32612..33667
DNA (1056bp) protein (352aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ferrochelatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX65_9GAMM
scnpilot_solids1_trim150_scaffold_749_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33664..34518
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX66_9GAMM
putative hydrolase or acyltransferase of alpha/beta superfamily
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGG90572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34535..36259)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX67_9GAMM
Peptidase family M49 {ECO:0000313|EMBL:AGG90573.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidase family M49
scnpilot_solids1_trim150_scaffold_749_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36443..37732
DNA (1290bp) protein (430aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX68_9GAMM
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGG90574.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_749_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37729..38235
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX69_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02726.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_749_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38389..38610
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX70_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90576.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 50 in total

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