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scnpilot_solids1_trim150_scaffold_514_curated

Search features with annotation key words

Displaying items 31-46 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_514_curated_31
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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34965..35234
DNA (270bp) protein (90aa)
Transcriptional regulator, XRE family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSI0_9GAMM
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EIM02422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator, XRE family
scnpilot_solids1_trim150_scaffold_514_curated_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35259..37298)
DNA (2040bp) protein (680aa)
Elongation factor G n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ62_9GAMM
translation elongation factor 2 (EF-2/EF-G)
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:AGG90282.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37661..38593
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRW1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90281.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38635..40608
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90280.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_514_curated_35
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40817..41416)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBD3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87904.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_36
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41419..42000)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZF0_9GAMM
Protein of unknown function (DUF3501)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_514_curated_37
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42085..43425)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJC8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99569.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe-S oxidoreductase
scnpilot_solids1_trim150_scaffold_514_curated_38
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43493..43912)
DNA (420bp) protein (140aa)
Rubrerythrin n=1 Tax=Rhodanobacter denitrificans RepID=I4WZE8_9GAMM
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AGG87907.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44042..45013)
DNA (972bp) protein (324aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WZE7_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87908.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_40
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45308..47989
DNA (2682bp) protein (894aa)
Aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJC5_9GAMM
Aminopeptidase {ECO:0000313|EMBL:EIL99566.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_514_curated_41
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48171..49247
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJD5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87911.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_42
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49255..50508)
DNA (1254bp) protein (418aa)
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Rhodanobacter denitrificans RepID=M4NDF7_9GAMM
polyhydroxyalkanoate depolymerase, intracellular
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:AGG87912.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_43
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50691..51206)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003482F0A
putative membrane protein/domain protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_514_curated_44
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51239..52174
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJC0_9GAMM
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tyrosine recombinase XerD
scnpilot_solids1_trim150_scaffold_514_curated_45
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52255..53028
DNA (774bp) protein (258aa)
Protein-disulfide isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZD9_9GAMM
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AGG87917.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_46
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53196..54617
DNA (1422bp) protein (474aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
Phosphoribosylformylglycinamidine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEH2_9GAMM
Displaying items 31-46 of 46 in total

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