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scnpilot_solids1_trim150_scaffold_514_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_514_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..516
DNA (516bp) protein (172aa)
Signal transduction histidine kinase n=3 Tax=Rhodanobacter denitrificans RepID=M4NJN1_9GAMM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG90312.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(518..940)
DNA (423bp) protein (141aa)
DNA polymerase III, chi subunit (EC:2.7.7.7)
DNA polymerase III subunit chi n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSM0_9GAMM
DNA polymerase III subunit chi {ECO:0000313|EMBL:EIM02462.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_514_curated_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..2451)
DNA (1488bp) protein (496aa)
Probable cytosol aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSM1_9GAMM
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase A
scnpilot_solids1_trim150_scaffold_514_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2552..3667
DNA (1116bp) protein (372aa)
Putative permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK1_9GAMM
putative permease
Putative permease {ECO:0000313|EMBL:AGG90309.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3664..4764
DNA (1101bp) protein (367aa)
Putative permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSM3_9GAMM
Putative permease {ECO:0000313|EMBL:EIM02465.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease
scnpilot_solids1_trim150_scaffold_514_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4850..5869
DNA (1020bp) protein (340aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:AGG90307.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AGG90307.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Threonine aldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM5_9GAMM
scnpilot_solids1_trim150_scaffold_514_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6104..10267
DNA (4164bp) protein (1388aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90305.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10278..11081
DNA (804bp) protein (268aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSM7_9GAMM
scnpilot_solids1_trim150_scaffold_514_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11114..11389)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYB2_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_514_curated_10
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11386..12075)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Enterovibrio norvegicus RepID=UPI0003189807
Uncharacterized protein {ECO:0000313|EMBL:EIK42929.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_514_curated_11
unknown

Not on your lists

comp(12075..12764)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_514_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12843..14777)
DNA (1935bp) protein (645aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM1_9GAMM
scnpilot_solids1_trim150_scaffold_514_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14817..15434)
DNA (618bp) protein (206aa)
Restriction endonuclease n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL0_9GAMM
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AGG90301.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_14
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15677..16456
DNA (780bp) protein (260aa)
SapC n=1 Tax=Rhodanobacter denitrificans RepID=M4NH67_9GAMM
SapC
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_514_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16518..16994)
DNA (477bp) protein (159aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL2_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90298.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17155..18633
DNA (1479bp) protein (493aa)
Ribonuclease II n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL3_9GAMM
exoribonuclease R
Exoribonuclease R {ECO:0000313|EMBL:AGG90297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18630..20525
DNA (1896bp) protein (632aa)
PGAP1-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRX6_9GAMM
PGAP1-like protein {ECO:0000313|EMBL:AGG90296.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PGAP1-like protein
scnpilot_solids1_trim150_scaffold_514_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20665..20889
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90295.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21008..22798)
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL6_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG90294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
acyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_514_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22828..23304)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKT3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90293.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23443..24654)
DNA (1212bp) protein (404aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
6-aminohexanoate-dimer hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH0_9GAMM
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:EIM02412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_514_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24859..25326
DNA (468bp) protein (156aa)
SET domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL9_9GAMM
SET domain-containing protein
SET domain-containing protein {ECO:0000313|EMBL:AGG90292.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25414..25932
DNA (519bp) protein (173aa)
Putative membrane protein/domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKM0_9GAMM
putative membrane protein/domain protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_514_curated_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25932..26612
DNA (681bp) protein (227aa)
RDD domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH3_9GAMM
RDD domain-containing protein {ECO:0000313|EMBL:EIM02415.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative membrane protein/domain protein
scnpilot_solids1_trim150_scaffold_514_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26609..27586
DNA (978bp) protein (326aa)
Uncharacterized membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKM2_9GAMM
uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:AGG90289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27576..29096
DNA (1521bp) protein (507aa)
Uncharacterized protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NKS8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90288.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29093..30205
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ65_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90287.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30202..31206
DNA (1005bp) protein (335aa)
ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ64_9GAMM
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:AGG90286.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_514_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31206..32513
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02420.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_514_curated_30
RIFOXYD1_FULL_OD1_36_11_curated, Parcubacteria, Bacteria

Not on your lists

33098..34198
DNA (1101bp) protein (367aa)
RelA/SpoT domain-containing protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WJG7_9GAMM
RelA/SpoT domain-containing protein
Tax=RIFOXYD1_FULL_OD1_36_11_curated
Displaying items 1-30 of 46 in total

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