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scnpilot_solids1_trim150_scaffold_4818_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4818_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1447)
DNA (1446bp) protein (482aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NCM1_9GAMM
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88440.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4818_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1551..1898)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WL99_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88439.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4818_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2046..2381)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_4818_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2545..3459
DNA (915bp) protein (305aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ0_9GAMM
protein involved in catabolism of external DNA
scnpilot_solids1_trim150_scaffold_4818_curated_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3499..4014
DNA (516bp) protein (172aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL08_9GAMM
starvation-inducible outer membrane lipoprotein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_4818_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4146..4955
DNA (810bp) protein (270aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NCL5_9GAMM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGG88435.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 6 items

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