ggKbase home page

scnpilot_solids1_trim150_scaffold_304_curated_24

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(39130..39576)

Top 3 Functional Annotations

Value Algorithm Source
PilE protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 154.0
  • Bit_score: 259
  • Evalue 2.30e-66
PilE protein {ECO:0000313|EMBL:EIM00559.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 154.0
  • Bit_score: 259
  • Evalue 3.20e-66
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 133.0
  • Bit_score: 231
  • Evalue 1.60e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAAACGATTCTCACCGGTTGACAGTGTCGCGACGACGGCCATGCGCGAGTGCCGCAGCGCCGGCTTCACCCTGATCGAGCTGATGATCGTGGTGGCCATCATCGCCATTCTGGCGGCGATTGCCTTGCCGACCTACACCAACTACATCACCAAGACCAAACGTGTGGCTGCGGAAGGTTGCCTGTCGGAGCACGCCAACTACATGGAGCGCTACTACACCACCAACCTCAGCTACAAGGGAGCGGCGTTGCCGGGGCTGGATTGCGCCAGCCCCCAGCGCACCGGCGCCAACTACCAGTGGGCCGTGGCGTCGGCGTCGACGTCGGGGTACAGCATCACCGCCACGCCGATCAACGCGCAGCTGACCCGCGACACCAAGTGCGGCACGCTTTCGATCAACCAGACCGGCACGCGCGGGGCCAGCAGCACGGACGGCTGCTGGTGA
PROTEIN sequence
Length: 149
MKRFSPVDSVATTAMRECRSAGFTLIELMIVVAIIAILAAIALPTYTNYITKTKRVAAEGCLSEHANYMERYYTTNLSYKGAALPGLDCASPQRTGANYQWAVASASTSGYSITATPINAQLTRDTKCGTLSINQTGTRGASSTDGCW*