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scnpilot_solids1_trim150_scaffold_1746_curated_17

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(15481..16728)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator family transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPC4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 415.0
  • Bit_score: 745
  • Evalue 2.20e-212
Major facilitator family transporter {ECO:0000313|EMBL:EIM01316.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 415.0
  • Bit_score: 745
  • Evalue 3.10e-212
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 415.0
  • Bit_score: 736
  • Evalue 4.20e-210

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGACCGATCCTGCCCACGGGCTTGTCCACCACGGCACGCCCGCGTTCCGCCGCACCAACCTGGCGCTGTTCGCCGCCGGCCTGTCCACGTTCGGGCTGCTGTACTGCGTGCAGCCGCTGATGCCGGAGTTCAGCCGGCACTACGGGGTGAACGAGGCGGCCGCGGCGTTGTCGCTGTCGCTGACCACCGGCGTGCTGGCGGTCGCGATGCTGTTCGCCGGCGGCGTGTCCGACGCGCTGGGGCGCAAGCCGGTGATGGTCGCCTCGCTGCTGGCCTCGGCGCTGCTGGTGCTGGTGAGCGCGCTGATGCCGGACTGGTCCGCGCTGCTGGTGGTGCGCACGCTGCTCGGACTGAGCCTGAGCGGGCTGCCGGCGGTGGCGATGACCTATCTCGGCGAGGAGATGGACGCCGAATCGATCGGCCTGGGGATGGGCCTGTACATCAGCGGCAGCGCGGTCGGCGGCATGGGCGGGCGGCTGATCACCGGCGTGCTGGCGGACTTCTTCGGCTGGCGCGTCGGGGTGGCGGCGGTCGCGTTGTTCGGCATCGTGGCTGCGCTGATCTTCTGGCGCATGCTGCCTGCCTCGCGGCATTTCACGGCGCAGCCGTTGCGCTGGCGCACGGTCGCGGGACGCTTCAACGGCATCTTCCATGACCGCGGCCTGCCGTGGCTGTTCGCCGAGGGCTTCCTGCTGCTTGGCGCGTTCGTCACCGTCTACAACTACCTCGGCTACCGGCTGATGGCGCCGCCGTACCGGTTGAGCCAGGCGGTGGTGGGGTCGATCTTCGCGATCTACCTGATCGGCACCTTCAGCTCGGCGTGGATGGGGCACCTGGCCGGCAAGCTCGGCCGGCGCAAGGTGTTGTGGTCGGCGTTCGCGCTGATGCTGGCCGGCGTGGCGCTGACCATGGCGCGACCGCTGCCGCTGGTCATGCTCGGCATCGTGGCGATCACCTTCGGCTTCTTCGGCGGCCACTCCATCGTCAGCAGCTGGGTCGGCCGCCGCGCCGGCGCGGCGAAGGCGCAGGCCGCGTCGGTCTACCTGTTCTGCTACTACATGGGTTCCAGCGTGGCCGGCGCCAGCGGCGGCTTGTTCTATGCGGCGCACGGCTGGAACGGGGTGGCGCTGTTCACCGGCGCGCTGGTGCTGGCCGGCCTCGCCATCGCGCTGGGCCTGGTGCGGCTGAAGCCGTTGGTCGACGTGGCCACGCCGCCGGCGCCGATGAGCCGCGGGGCGATGGGGTAG
PROTEIN sequence
Length: 416
MTDPAHGLVHHGTPAFRRTNLALFAAGLSTFGLLYCVQPLMPEFSRHYGVNEAAAALSLSLTTGVLAVAMLFAGGVSDALGRKPVMVASLLASALLVLVSALMPDWSALLVVRTLLGLSLSGLPAVAMTYLGEEMDAESIGLGMGLYISGSAVGGMGGRLITGVLADFFGWRVGVAAVALFGIVAALIFWRMLPASRHFTAQPLRWRTVAGRFNGIFHDRGLPWLFAEGFLLLGAFVTVYNYLGYRLMAPPYRLSQAVVGSIFAIYLIGTFSSAWMGHLAGKLGRRKVLWSAFALMLAGVALTMARPLPLVMLGIVAITFGFFGGHSIVSSWVGRRAGAAKAQAASVYLFCYYMGSSVAGASGGLFYAAHGWNGVALFTGALVLAGLAIALGLVRLKPLVDVATPPAPMSRGAMG*