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scnpilot_solids1_trim150_scaffold_562_curated_27

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(31672..32670)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 645
  • Evalue 1.00e-182
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 645
  • Evalue 4.60e-182
DNA-directed RNA polymerase subunit alpha n=2 Tax=Rhodanobacter RepID=I4WKT7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 332.0
  • Bit_score: 645
  • Evalue 3.30e-182

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGCAGTTTCGTCAACTAGCGTGCTGCGGCCGCGTGGCCTCAGCGTCGAACAGCTCGGGGCCAACCGCGCCAAGGTGGTGGTCGAGCCGCTCGAGCGTGGCTTTGGCCACACCCTGGGCAACGCGCTGCGTCGCGTGCTGCTCTCCTCGATCCCCGGCAGCGCCATCGTCGAGGTCGAAATCGATGGCGTGCTGCACGAGTACACCACCCTGGAAGGCCTGCAGGAGGACGTGATCGAAGTCCTGCTGAACCTCAAGGACGTGGCGATCCGTCAGCACAGCGGCGACGAGGTCACCCTGACCCTGTCCAAGAAGGGCAAGGGCGTGGTCACGGCCGGCGACATCGTCGTCGACCACTCGGTGGAGATCATCAATCCCGAGCACGTGATCTGCCACCTGACCAAGGACATCGCGCTCAACATGCGCCTGAAGGTGCGCCGCGGCGTCGGCTACCAGCCGGCCAGCGCACGCCAGCACCCGGATGACGAAGCGCGCCCGATCGGCCGCCTGCAGCTGGACGCGTCGTTCGCGCCGGTGCTGCGCGTGGCCTACGAGGTGGATGCCGCCCGTGTCGAGCAGCGCACCAACCTCGACAAGCTGGTGCTGGACATCGAGACCAACGGCACCATCGGTGCCGAAGACGCAGTGCGCAAGGCGGCCGAGATCATCAACGACCAGTTGTCGGTGTTCGGCGATTTCTCGCGTCGCGAGAGCGCCACCGACAAGGCGGAGAAGAGCGGTTTCGATCCGCTGCTGTTGCGCCCGATCGACGATCTGGAGCTCACCGTGCGTTCGGCGAACTGCCTGAAGGCCGAGAGCATCTACTACATCGGCGACCTGGTGCAGAAGACCGAGGTCGAGCTGCTGAAGACGCCGAACCTGGGCAAGAAGTCGCTCACCGAGATCAAGGACGTGCTGGGCGGCCGTGGCCTCGCGCTCGGCATGAAGCTCGAGAACTGGCCGCCGCCGGGGTTGTCGCACGGCATGCAGCTTGGCTGA
PROTEIN sequence
Length: 333
MAVSSTSVLRPRGLSVEQLGANRAKVVVEPLERGFGHTLGNALRRVLLSSIPGSAIVEVEIDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRQHSGDEVTLTLSKKGKGVVTAGDIVVDHSVEIINPEHVICHLTKDIALNMRLKVRRGVGYQPASARQHPDDEARPIGRLQLDASFAPVLRVAYEVDAARVEQRTNLDKLVLDIETNGTIGAEDAVRKAAEIINDQLSVFGDFSRRESATDKAEKSGFDPLLLRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLTEIKDVLGGRGLALGMKLENWPPPGLSHGMQLG*