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scnpilot_solids1_trim150_scaffold_562_curated_28

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(32688..33314)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKT6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 208.0
  • Bit_score: 409
  • Evalue 1.90e-111
SSU ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 208.0
  • Bit_score: 408
  • Evalue 1.30e-111
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 208.0
  • Bit_score: 408
  • Evalue 5.90e-111

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCCCGTTATCGTGGAGCTACCTGCAAACTCGCCCGTCGTGAGGGTGCAGATCTCAGCCTGAAGAGCCCGGCGCGCGCGCTGGATTCCAAGTGCAAGCTGGAGAACAAGCCCGGTCAGCATGGCGCCAACAAGCGCATGCGCATGTCCGACTACGCCGTGCAGTTGCGTGAAAAGCAGAAGGTCAAGCGCATCTACGGCGTGCTTGAGCGCCAGTTCAGCAACTACTACACCAAGGCGACCACCCTCAAGGGCAACACCGGCGAGAACCTGTTGCGCCTGCTCGAGAGCCGTCTGGACAACGTCGTCTACCGCATGGGCTTCGCGGTCACCCGCGCCCAGGCCCGCCAGCTGGTCGCGCACAAGGCGATCCTGGTGAACGGCAAGAAGGTGAACATCCCTTCGTACCAGGTGCGGCCGGGCGACGCGATCGCGCTGACCGAGCGCGCCCGCAACCAACTGCGCGTGCAGGAAGCGGCGACCGTGTTCGACACCATGGACCTGCGTCCGGGTTGGGTCGAGGTCGATAGCAAGAAGTTCGAAGGTACGTTCAAGTCGGTGCCGGATCGTGGCGATCTGCCGTCCGACATCAATGAAGCCCTGATCGTCGAGCTTTACTCGAAGTAA
PROTEIN sequence
Length: 209
MARYRGATCKLARREGADLSLKSPARALDSKCKLENKPGQHGANKRMRMSDYAVQLREKQKVKRIYGVLERQFSNYYTKATTLKGNTGENLLRLLESRLDNVVYRMGFAVTRAQARQLVAHKAILVNGKKVNIPSYQVRPGDAIALTERARNQLRVQEAATVFDTMDLRPGWVEVDSKKFEGTFKSVPDRGDLPSDINEALIVELYSK*