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scnpilot_solids1_trim150_scaffold_874_curated_3

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 1186..1770

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NDX3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 1.60e-104
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 5.00e-105
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG88092.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 2.20e-104

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACGGCGTGGTCGGCACGCTCGACACGGACCTGCTGGGCGACGCGCGCGAAACGCCCGCCACGCTGGAGGCGTTCCTGGCGCAGGTCGAGCGGCGCGCGTTCCGCATGGCCGAGCTGCAGCTGCGCCACCGCGAGGACGCCATGGACGCGGTGCAGGACGCCATGCTGCGGCTGGTCAGGCACTACCGCGACAAGCCCGCCATGGAATGGGCGCCGCTGTTCTGGGGCATCCTGCGCCGGCGCGTGGTCGACCTGCAGCGCCGGCGCAAGGTGCGCTCGATCGTGGTGGGCTGGCTCGGCGGCGGCCGCGACGACGACGGCGACGAACTGCCCGCCTGGGAGCCGGCCGACCCCGGCCAGGACCCGCTGGGCCGGCTGCACGACGTGCAGTCGTACGCGGACCTGGCCACCGCGGTCAGGCAACTGCCGCAACGCCAGCGCGAGGCCTTCATGCTGCGCATGCTGGAAGGGCTGGACGTGGCGGAGACCGCCCGCGCCATGGGCTGCTCCGAAGGCAGCGTGAAAACCCATCTGTCCCGCGCGATGCATCATCTGCGCGACCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 195
MNGVVGTLDTDLLGDARETPATLEAFLAQVERRAFRMAELQLRHREDAMDAVQDAMLRLVRHYRDKPAMEWAPLFWGILRRRVVDLQRRRKVRSIVVGWLGGGRDDDGDELPAWEPADPGQDPLGRLHDVQSYADLATAVRQLPQRQREAFMLRMLEGLDVAETARAMGCSEGSVKTHLSRAMHHLRDQLEDWR*