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scnpilot_solids1_trim150_scaffold_776_curated_20

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 23375..23956

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 193.0
  • Bit_score: 341
  • Evalue 6.30e-91
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 193.0
  • Bit_score: 342
  • Evalue 2.00e-91
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 193.0
  • Bit_score: 341
  • Evalue 1.40e-91

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAACGGCGGGCGCCGGGCCGCGTCGGGGCGCATCCGCATCATCGGCGGCAGCCTGCGCAATTCGCGGCTGGAGGTGCCGGAGCTGCCCGGCCTGCGGCCCACCCCCGAGCGGGTGCGCGAAACCCTGTTCAACTGGCTGGCGCCGGTGCTCGAGGGCGCGCGCTGCCTGGACCTGTGCGCGGGCACCGGCGCGCTCGGCATCGAGGCGCTGTCGCGCGGGGCAGCCGGCGTGCAGCTCGTCGAGCGCGACGCGCGCGCCGCACAGGCCTTGCGCGCGAACCTGGCGCGGCTCAAGGCCGACGGCGGCCAGGTGGCCGCGCTGGATGCGGTGGCGTTCCTGCAGGGCGCGGCGCAACCGTACGACCTGGTCTTCCTCGACCCGCCGTTCGCGCTGGAGCTGTGGCCGACGCTGGCGCGGCAGATCGAGCAGGGCGGCTGGCTGGCCGCGCCGGGCTGGATCTACGTGGAGTCGCCGCGCGGCCACGTGCCGGCGCTGCCGGCGAACTGGCGACTGCACCGCGAGGGTCAGGCCGGCGAGGTGCGCTTTGCGCTCTATCGGCGCGCGCTTCCGTTAAGCTAG
PROTEIN sequence
Length: 194
MNGGRRAASGRIRIIGGSLRNSRLEVPELPGLRPTPERVRETLFNWLAPVLEGARCLDLCAGTGALGIEALSRGAAGVQLVERDARAAQALRANLARLKADGGQVAALDAVAFLQGAAQPYDLVFLDPPFALELWPTLARQIEQGGWLAAPGWIYVESPRGHVPALPANWRLHREGQAGEVRFALYRRALPLS*