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scnpilot_solids1_trim150_scaffold_776_curated

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_776_curated_1
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272..1861)
DNA (1590bp) protein (530aa)
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:EXI68196.1}; EC=2.1.2.9 {ECO:0000313|EMBL:EXI68196.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Polysaccharide deacetylase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT01_ACCPU
polysaccharide deacetylase
scnpilot_solids1_trim150_scaffold_776_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2500..3189
DNA (690bp) protein (230aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphatidylserine decarboxylase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS8_9GAMM
phosphatidylserine decarboxylase
scnpilot_solids1_trim150_scaffold_776_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3186..3383
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90132.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3411..6218)
DNA (2808bp) protein (936aa)
Putative PEP-CTERM system TPR-repeat lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRE6_9GAMM
Putative PEP-CTERM system TPR-repeat lipoprotein {ECO:0000313|EMBL:AGG90131.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative PEP-CTERM system TPR-repeat lipoprotein
scnpilot_solids1_trim150_scaffold_776_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6256..7617)
DNA (1362bp) protein (454aa)
PEP-CTERM-box response regulator transcription factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ7_9GAMM
PEP-CTERM-box response regulator transcription factor
PEP-CTERM-box response regulator transcription factor {ECO:0000313|EMBL:AGG90130.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7614..9695)
DNA (2082bp) protein (694aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative PEP-CTERM system histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGV6_9GAMM
putative PEP-CTERM system histidine kinase
scnpilot_solids1_trim150_scaffold_776_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9763..10932)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS3_9GAMM
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGG90128.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11159..12043)
DNA (885bp) protein (295aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS2_9GAMM
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGG90127.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12318..13133)
DNA (816bp) protein (272aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRE0_9GAMM
PEP-CTERM putative exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90126.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13760..14815)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90125.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15376..16179
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02204.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_776_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16382..17089)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKB9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90123.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17479..18219)
DNA (741bp) protein (247aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ52_9GAMM
PEP-CTERM putative exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90122.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_14
unknown

Not on your lists

18553..18750
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_776_curated_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18768..19268
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003691D06
ATPase {ECO:0000313|EMBL:KGI77891.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
activator of Hsp90 ATPase 1 family protein
scnpilot_solids1_trim150_scaffold_776_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..19914)
DNA (279bp) protein (93aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKA4_9GAMM
Fe-S cluster protector protein
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20027..21067)
DNA (1041bp) protein (347aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific DNA-adenine glycosylase {ECO:0000313|EMBL:AGG90107.1}; EC=3.2.2.- {ECO:0000313|EMBL:AGG90107.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
A/G-specific DNA-adenine glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ39_9GAMM
scnpilot_solids1_trim150_scaffold_776_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21064..22134)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR4_9GAMM
uncharacterized protein involved in outer membrane biogenesis
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:AGG90106.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22158..23300)
DNA (1143bp) protein (381aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR3_9GAMM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23375..23956
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM
16S rRNA m(2)G-966 methyltransferase
scnpilot_solids1_trim150_scaffold_776_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23983..24534
DNA (552bp) protein (184aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR1_9GAMM
scnpilot_solids1_trim150_scaffold_776_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24527..25030
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90102.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25176..25436
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90101.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25433..27157
DNA (1725bp) protein (575aa)
Gamma-glutamyltransferase 1 {ECO:0000313|EMBL:AGG90100.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AGG90100.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ8_9GAMM
scnpilot_solids1_trim150_scaffold_776_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27168..27323
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90099.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27325..28197
DNA (873bp) protein (291aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ7_9GAMM
Zn-dependent hydrolase, glyoxylase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG90098.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28197..29234
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ6_9GAMM
Protein of unknown function (DUF1625)
Uncharacterized protein {ECO:0000313|EMBL:AGG90097.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29263..30546)
DNA (1284bp) protein (428aa)
Putative signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NRA7_9GAMM
putative signal transduction protein containing EAL and modified HD-GYP domains
Putative signal transduction protein containing EAL and modified HD-GYP domains {ECO:0000313|EMBL:AGG90096.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30653..31099)
DNA (447bp) protein (149aa)
Flagellar biosynthesis/type III secretory pathway chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NGM3_9GAMM
flagellar biosynthesis/type III secretory pathway chaperone
Flagellar biosynthesis/type III secretory pathway chaperone {ECO:0000313|EMBL:AGG90095.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31096..31419)
DNA (324bp) protein (108aa)
Anti-sigma-28 factor FlgM n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ3_9GAMM
flagellar biosynthesis anti-sigma factor FlgM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:AGG90094.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 63 in total

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