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scnpilot_solids1_trim150_scaffold_541_curated_13

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(10325..10534)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 69.0
  • Bit_score: 142
  • Evalue 1.90e-31
Cold shock protein {ECO:0000313|EMBL:EIM03067.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 69.0
  • Bit_score: 142
  • Evalue 2.70e-31
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 140
  • Evalue 1.70e-31

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGTCTGATCGTCAGATGGGTACCGTCAAGTGGTTCAACGACGCCAAGGGCTTCGGTTTCATTGCCCGCGACAATGGCCCGGACGTTTTCGTGCACTTCCGCGCCATTACCGGCAGCGGCTTCAAGAGCCTGCAGGAAGGCCAGCAGGTCTCGTTCAAGGTGGTGCAGGGCCAGAAGGGCCTGCAGGCCGAGGAAGTGACTCCGGCCTGA
PROTEIN sequence
Length: 70
MSDRQMGTVKWFNDAKGFGFIARDNGPDVFVHFRAITGSGFKSLQEGQQVSFKVVQGQKGLQAEEVTPA*