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scnpilot_solids1_trim150_scaffold_541_curated

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_541_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1203)
DNA (1203bp) protein (401aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN6_9GAMM
molecular chaperone of HSP90 family
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1277..2179)
DNA (903bp) protein (301aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Protease HtpX n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ39_9GAMM
Heat shock protein
scnpilot_solids1_trim150_scaffold_541_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2307..3173
DNA (867bp) protein (289aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI06_9GAMM
glutamyl-queuosine tRNA(Asp) synthetase
scnpilot_solids1_trim150_scaffold_541_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3285..4025
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.36 1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89738.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89738.1};; EC=1.1.1.36 {ECO:0000313|EMBL:AGG89738.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY79_9GAMM
scnpilot_solids1_trim150_scaffold_541_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4143..5066
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY78_9GAMM
Sel1 repeat protein
Sel1 repeat protein {ECO:0000313|EMBL:AGG89739.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5155..6006)
DNA (852bp) protein (284aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN9_9GAMM
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGG89740.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6081..6470
DNA (390bp) protein (130aa)
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WY76_9GAMM
cytochrome c556
Cytochrome c556 {ECO:0000313|EMBL:AGG89741.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6480..6782)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY75_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89742.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6858..7733)
DNA (876bp) protein (292aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ77_9GAMM
Pirin-related protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_541_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7745..8803)
DNA (1059bp) protein (353aa)
NADH:flavin oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT0_9GAMM
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGG89744.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..9773)
DNA (918bp) protein (306aa)
Putative alpha/beta hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY72_9GAMM
putative alpha/beta hydrolase
Putative alpha/beta hydrolase {ECO:0000313|EMBL:AGG89745.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9858..10067)
DNA (210bp) protein (70aa)
Cold shock protein n=2 Tax=Rhodanobacter RepID=I4WY71_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:EIM03068.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_541_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10325..10534)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC5_9GAMM
Cold shock protein {ECO:0000313|EMBL:EIM03067.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
scnpilot_solids1_trim150_scaffold_541_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10863..11321
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY69_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89748.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11346..12581)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89749.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12767..13147
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY67_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89750.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13260..14357
DNA (1098bp) protein (366aa)
Outer membrane phospholipase A n=1 Tax=Rhodanobacter denitrificans RepID=I4WY66_9GAMM
outer membrane phospholipase A
Outer membrane phospholipase A {ECO:0000313|EMBL:AGG89751.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..14912)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY65_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids1_trim150_scaffold_541_curated_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15007..15492)
DNA (486bp) protein (162aa)
Glutathione peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY64_9GAMM
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_541_curated_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15562..16605
DNA (1044bp) protein (348aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WY63_9GAMM
ABC-type metal ion transport system, ATPase component
scnpilot_solids1_trim150_scaffold_541_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16602..17279
DNA (678bp) protein (226aa)
ABC-type metal ion transport system permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q5_9GAMM
ABC-type metal ion transport system permease {ECO:0000313|EMBL:EIL94096.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type metal ion transport system, permease component
scnpilot_solids1_trim150_scaffold_541_curated_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17346..18143
DNA (798bp) protein (266aa)
Metal ion ABC transporter substrate-binding protein/surface antigen n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB7_9GAMM
Metal ion ABC transporter substrate-binding protein/surface antigen {ECO:0000313|EMBL:EIM03059.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
scnpilot_solids1_trim150_scaffold_541_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18189..19373)
DNA (1185bp) protein (395aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY60_9GAMM
nicotinate phosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_541_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19708..20514
DNA (807bp) protein (269aa)
Cytochrome c1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ90_9GAMM
cytochrome c1
Cytochrome c1 {ECO:0000313|EMBL:AGG89758.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20528..21622)
DNA (1095bp) protein (365aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89759.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21644..22072)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFQ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89760.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22249..22587)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ69_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89761.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22680..23285)
DNA (606bp) protein (202aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_541_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23465..24343
DNA (879bp) protein (293aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB0_9GAMM
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EIM03052.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phenazine biosynthesis protein PhzF family
scnpilot_solids1_trim150_scaffold_541_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24356..25240)
DNA (885bp) protein (295aa)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU4_9GAMM
beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AGG89764.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 75 in total

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