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scnpilot_solids1_trim150_scaffold_541_curated_34

Organism: solids_Rhodanobacter_3

near complete RP 50 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(27881..28546)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ99_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 221.0
  • Bit_score: 377
  • Evalue 1.10e-101
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 221.0
  • Bit_score: 377
  • Evalue 3.50e-102
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:AGG89768.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 221.0
  • Bit_score: 377
  • Evalue 1.60e-101

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCGCAAGCCTTGACCGCCACCGCCTGTCTGGGTCTAGATAGTGGACTTTTCCTGCGGGCGAGTCCCGAGCCGAGCATGCCAGCCGATGTCGCCACGGCGAACGACAGCGAATCGCCCGACCAGCGCCGGGCGGCGTGGATGGCCGCTGCGCAGGCGGGCGACCGACGCGCCTACGAGAAGCTGCTGGCCGATTCGGTGGCGCTGATCCGCGCTACGGCGCGGCGCCATGGCGTCGCGCCGGATGGCCTCGACGACGTGGTGCAGGAAACCCTGATCACCGTGCACCGGGTGCGCCATACCTACGATCCGGCCCGTTCGTACGACGCGTGGCTGACCGCGATCGCCAGCCGCCGCGCAGTCGACGCGTTGCGCAGCCGTGGCCGTCGCGACAGCCGCGAGCTGCACGACGAATTTGCGCTCGACAACCACCCGGACCGCGACGACGCCAGCGCCGCCACCGAGAGCGAACAGCGCGCGCAGCGCCTGCACGCGGCGATCGCCGACCTGCCGCCGGGCCAGCGCGAGGCAGTGGAACAGCTGGGCCTGCGCGAGCGCTCGCTCAGCGAGGCGGCCGAACTGACCGGGCGCAACACCGGTGCGCTGAAGGTGAACCTGCATCGTGCGCTGAAGGCGCTGCGCGAACGTTTCCATGGAGAACCCTGA
PROTEIN sequence
Length: 222
MSQALTATACLGLDSGLFLRASPEPSMPADVATANDSESPDQRRAAWMAAAQAGDRRAYEKLLADSVALIRATARRHGVAPDGLDDVVQETLITVHRVRHTYDPARSYDAWLTAIASRRAVDALRSRGRRDSRELHDEFALDNHPDRDDASAATESEQRAQRLHAAIADLPPGQREAVEQLGLRERSLSEAAELTGRNTGALKVNLHRALKALRERFHGEP*