ggKbase home page

scnpilot_solids1_trim150_scaffold_237_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_237_curated_1
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76..405)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C0Z0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ37283.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_237_curated_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(402..1124)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036B21DE
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
scnpilot_solids1_trim150_scaffold_237_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1443..5183
DNA (3741bp) protein (1247aa)
SNF2-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF39_NIAKG
SNF2-related protein {ECO:0000313|EMBL:AEW02659.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SNF2-related protein
scnpilot_solids1_trim150_scaffold_237_curated_4
unknown

Not on your lists

comp(5189..5323)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_237_curated_5
unknown

Not on your lists

comp(5442..5597)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_237_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5784..7088)
DNA (1305bp) protein (435aa)
AAA ATPase central domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK95_NIAKG
AAA ATPase; K07478 putative ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:AEV96529.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_237_curated_7
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7066..8343)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AID2_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48739.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
scnpilot_solids1_trim150_scaffold_237_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8467..8793
DNA (327bp) protein (109aa)
pyrophosphatase n=1 Tax=Segetibacter koreensis RepID=UPI0003657AE3
Pyrophosphatase {ECO:0000313|EMBL:KIC96200.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative pyrophosphatase
scnpilot_solids1_trim150_scaffold_237_curated_9
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8903..9202)
DNA (300bp) protein (100aa)
PIN-domain protein n=2 Tax=Cyanothece RepID=A1KYF9_CYAA5
pilt protein domain protein; K07062
PIN-domain protein {ECO:0000313|EMBL:AAW57012.1}; Uncharacterized protein {ECO:0000313|EMBL:ACB49934.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
scnpilot_solids1_trim150_scaffold_237_curated_10
unknown

Not on your lists

comp(9187..9444)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_237_curated_11
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9582..11069)
DNA (1488bp) protein (496aa)
Xylulose kinase {ECO:0000313|EMBL:EOR96418.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EOR96418.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
Xylulose kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXL6_9SPHI
scnpilot_solids1_trim150_scaffold_237_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11097..12251)
DNA (1155bp) protein (385aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
D-mannonate dehydratase; K01686 mannonate dehydratase [EC:4.2.1.8]
mannonate dehydratase n=1 Tax=Niabella aurantiaca RepID=UPI000379EEF4
scnpilot_solids1_trim150_scaffold_237_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12560..15889
DNA (3330bp) protein (1110aa)
preprotein translocase subunit SecA n=1 Tax=Segetibacter koreensis RepID=UPI00037B0218
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
protein translocase subunit secA; K03070 preprotein translocase subunit SecA
scnpilot_solids1_trim150_scaffold_237_curated_14
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15971..16678)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1J8_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02974.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_237_curated_15
unknown

Not on your lists

comp(16755..17417)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TUV5_9FLAO
scnpilot_solids1_trim150_scaffold_237_curated_16
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17458..18501)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EOR94624.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EOR94624.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
alcohol dehydrogenase GroES domain-containing protein; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000344A40E
scnpilot_solids1_trim150_scaffold_237_curated_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(18903..20027)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E3A097
transglutaminase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids1_trim150_scaffold_237_curated_18
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20235..21497
DNA (1263bp) protein (421aa)
Sodium/hydrogen exchanger n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZU73_9BACT
Sodium:proton antiporter {ECO:0000313|EMBL:KEY18087.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
scnpilot_solids1_trim150_scaffold_237_curated_19
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21591..22583
DNA (993bp) protein (331aa)
SMP-30/gluconolaconase/LRE-like region-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIY0_RUNSL
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AEI49654.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_237_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22762..23184)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45098.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_237_curated_21
unknown

Not on your lists

comp(23153..23947)
DNA (795bp) protein (265aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_237_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23978..24529)
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03102.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_237_curated_23
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24675..25346)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000315D849
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ADY32012.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
scnpilot_solids1_trim150_scaffold_237_curated_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(25410..26540)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003177CF5
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
scnpilot_solids1_trim150_scaffold_237_curated_25
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26687..27658)
DNA (972bp) protein (324aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7P3_OWEHD
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AEV32396.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids1_trim150_scaffold_237_curated_26
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27781..28161)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:AII51332.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_237_curated_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28145..28831)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F531_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00625.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_237_curated_28
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28864..30027)
DNA (1164bp) protein (388aa)
Glycosyltransferase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z605_BELBD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFL84673.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids1_trim150_scaffold_237_curated_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30123..31964)
DNA (1842bp) protein (614aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ADY51401.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADY51401.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Asparagine synthetase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9P5_PEDSD
scnpilot_solids1_trim150_scaffold_237_curated_30
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32054..33271)
DNA (1218bp) protein (406aa)
Glycosyl transferase, group 1 n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEM5_9PROT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EDM22990.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
group 1 glycosyl transferase
Displaying items 1-30 of 56 in total

View Taxonomy