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scnpilot_solids1_trim150_scaffold_502_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_502_curated_1
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3..257
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J458_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL27484.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_502_curated_2

Not on your lists

446..1720
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DHS0_RHOBT
Marine sediment metagenome DNA, contig: S01H1_L01022 {ECO:0000313|EMBL:GAF73688.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_502_curated_3
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2017..5169
DNA (3153bp) protein (1051aa)
TonB-dependent receptor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V5T8_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EPR65545.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
putative Tonb-dependent outer membrane receptor
scnpilot_solids1_trim150_scaffold_502_curated_4
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5188..6813
DNA (1626bp) protein (542aa)
Putative nutrient binding outer membrane protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WFM2_9BACT
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR65544.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_502_curated_5
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6944..8464
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J458_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL27484.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_502_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8673..10244
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D3203
Uncharacterized protein {ECO:0000313|EMBL:AHF17195.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane-bound dehydrogenase
scnpilot_solids1_trim150_scaffold_502_curated_7
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10267..10671
DNA (405bp) protein (135aa)
Transposase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTQ3_SOLCM
transposase
Transposase {ECO:0000313|EMBL:AFD06628.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_502_curated_8
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10779..11642
DNA (864bp) protein (288aa)
Transposase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WPK8_9BACT
Integrase {ECO:0000313|EMBL:EZH73172.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_502_curated_9
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12042..13607
DNA (1566bp) protein (522aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Joostella marina DSM 19592 RepID=I3C603_9FLAO
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:EIJ39046.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
D-glutamate deacylase
scnpilot_solids1_trim150_scaffold_502_curated_10
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13711..16749
DNA (3039bp) protein (1013aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A3021
Putative cytochrome c {ECO:0000313|EMBL:EPR65539.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
membrane-bound dehydrogenase domain-containing protein
scnpilot_solids1_trim150_scaffold_502_curated_11
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16801..17055
DNA (255bp) protein (85aa)
hypothetical protein id=2997556 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids1_trim150_scaffold_502_curated_12
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17061..17327
DNA (267bp) protein (89aa)
Putative enzyme {ECO:0000313|EMBL:CCI26045.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCI26045.1};; TaxID=1160284 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9808.;"
Toxin RelK n=3 Tax=Microcystis aeruginosa RepID=S3J3H3_MICAE
toxin-antitoxin system, toxin component, Txe/YoeB family
scnpilot_solids1_trim150_scaffold_502_curated_13
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17475..18854
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377E43B
Uncharacterized protein {ECO:0000313|EMBL:EON76174.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_502_curated_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19114..19968
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D9BB0
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEI47279.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_502_curated_15
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20131..20907
DNA (777bp) protein (259aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4APA7_FLELS
3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AFM05792.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_solids1_trim150_scaffold_502_curated_16
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20938..22332
DNA (1395bp) protein (465aa)
Citrate transporter n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X4U4_ANEAE
Strain NCTC 7096 contig_242, whole genome shotgun sequence {ECO:0000313|EMBL:KIV52063.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
H+/gluconate symporter family protein
scnpilot_solids1_trim150_scaffold_502_curated_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22568..24280
DNA (1713bp) protein (571aa)
Dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Segetibacter koreensis RepID=UPI00037C4112
Uncharacterized protein {ECO:0000313|EMBL:ETZ22297.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids1_trim150_scaffold_502_curated_18
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24298..25065
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372744D
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AHM58376.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
scnpilot_solids1_trim150_scaffold_502_curated_19
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25223..26389
DNA (1167bp) protein (389aa)
Oxidoreductase {ECO:0000313|EMBL:KIA86732.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Oxidoreductase domain protein id=4974965 bin=GWA2_Flavobacterium_35_26 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
oxidoreductase domain-containing protein
scnpilot_solids1_trim150_scaffold_502_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26426..27484
DNA (1059bp) protein (353aa)
AP endonuclease 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA0_NIAKG
Putative sugar dehydratase {ECO:0000313|EMBL:GAO44225.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
AP endonuclease 2 domain protein
scnpilot_solids1_trim150_scaffold_502_curated_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27558..28421)
DNA (864bp) protein (288aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RPV2_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:KFC59794.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_502_curated_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28744..30135)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003666A35
Uncharacterized protein {ECO:0000313|EMBL:KIC90221.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
D-alanyl-D-alanine carboxypeptidase
scnpilot_solids1_trim150_scaffold_502_curated_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30238..31497
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003625FD6
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
scnpilot_solids1_trim150_scaffold_502_curated_24

Not on your lists

comp(31566..32360)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035E3747
Marine sediment metagenome DNA, contig: S03H2_S21257 {ECO:0000313|EMBL:GAH89454.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_502_curated_25
unknown

Not on your lists

32398..32550
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_502_curated_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32574..37154)
DNA (4581bp) protein (1527aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQR5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91425.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_502_curated_27
unknown

Not on your lists

comp(37225..37467)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_502_curated_28
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37499..37990)
DNA (492bp) protein (164aa)
protein tyrosine phosphatase (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
protein-tyrosine phosphatase n=1 Tax=Flavobacterium rivuli RepID=UPI0003667493
Protein tyrosine phosphatase {ECO:0000313|EMBL:KGO86281.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
scnpilot_solids1_trim150_scaffold_502_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38041..38886)
DNA (846bp) protein (282aa)
arsenite S-adenosylmethyltransferase n=1 Tax=Pedobacter arcticus RepID=UPI00030DC0F5
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEW00358.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_502_curated_30
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38898..39230)
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator n=1 Tax=Cytophaga aurantiaca RepID=UPI0003701B86
ArsR family transcriptional regulator {ECO:0000313|EMBL:KFC59773.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
regulatory protein ArsR
Displaying items 1-30 of 38 in total

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