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scnpilot_solids1_trim150_scaffold_86_curated

Search features with annotation key words

Displaying items 1-30 of 284 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_86_curated_1
unknown

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_86_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

274..1005
DNA (732bp) protein (244aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96182.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_86_curated_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1018..1305)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000361034E
Uncharacterized protein {ECO:0000313|EMBL:AKD02614.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_86_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1317..1778)
DNA (462bp) protein (154aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Niabella soli DSM 19437 RepID=H1NS65_9SPHI
Thiol peroxidase {ECO:0000313|EMBL:AHF16043.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_86_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1838..3571)
DNA (1734bp) protein (578aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML8_NIAKG
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEW02006.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_86_curated_6
unknown

Not on your lists

3610..3894
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_86_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4085..5743
DNA (1659bp) protein (553aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D0BA0
scnpilot_solids1_trim150_scaffold_86_curated_8
unknown

Not on your lists

5777..6040
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_86_curated_9
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6058..6285
DNA (228bp) protein (76aa)
Uncharacterized small protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TCI4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKD35004.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_86_curated_10
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6287..6463
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Arthrospira platensis RepID=K6E341_ARTPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI91726.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
scnpilot_solids1_trim150_scaffold_86_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6453..7646
DNA (1194bp) protein (398aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371ACD9
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_86_curated_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7875..8327
DNA (453bp) protein (151aa)
4-carboxymuconolactone decarboxylase domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1U8_MYXXD
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids1_trim150_scaffold_86_curated_13
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8411..8764
DNA (354bp) protein (118aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRN8_AEQSU
alkylhydroperoxidase
scnpilot_solids1_trim150_scaffold_86_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8942..9361
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003722D38
Uncharacterized protein {ECO:0000313|EMBL:KIC94357.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
CMP/dCMP deaminase zinc-binding protein
scnpilot_solids1_trim150_scaffold_86_curated_15
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9464..10558
DNA (1095bp) protein (365aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
talA; transaldolase (EC:5.3.1.9)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AFF29
scnpilot_solids1_trim150_scaffold_86_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10654..11361)
DNA (708bp) protein (236aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW5_NIAKG
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEW02050.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_86_curated_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11520..12218
DNA (699bp) protein (233aa)
glycosyl transferase family protein id=7717612 bin=BACIGN_2 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
glycosyl transferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids1_trim150_scaffold_86_curated_18
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12272..12625
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8A9_NITMU
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
scnpilot_solids1_trim150_scaffold_86_curated_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12669..13124
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC89354.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
BadM/Rrf2 family transcriptional regulator
scnpilot_solids1_trim150_scaffold_86_curated_20
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13129..15021)
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368438D
Chloride channel protein {ECO:0000313|EMBL:AIZ62646.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
Cl-channel voltage-gated family protein
scnpilot_solids1_trim150_scaffold_86_curated_21
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15185..15583)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FEC90
Globin {ECO:0000313|EMBL:KJJ38996.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
globin family protein; K06886 hemoglobin
scnpilot_solids1_trim150_scaffold_86_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15698..16141)
DNA (444bp) protein (148aa)
alkylhydroperoxidase id=4596336 bin=GWC2_Bacteroidetes_46_850 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
alkylhydroperoxidase
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_86_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16147..16989)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379EEBD
putative carboxyphosphonoenolpyruvate phosphonomutase protein
Putative carboxyphosphonoenolpyruvate phosphonomutase protein {ECO:0000313|EMBL:ACT94312.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_86_curated_24
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16991..17587)
DNA (597bp) protein (199aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PNU7_MURRD
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:AEM70282.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
scnpilot_solids1_trim150_scaffold_86_curated_25
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17689..18303)
DNA (615bp) protein (205aa)
nicotinamidase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
Bifunctional pyrazinamidase/nicotinamidase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWJ0_9SPHI
Isochorismatase {ECO:0000313|EMBL:KFF24944.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
scnpilot_solids1_trim150_scaffold_86_curated_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18424..19581
DNA (1158bp) protein (386aa)
ATP synthase F0 subcomplex subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase F0 subunit A n=1 Tax=Niabella aurantiaca RepID=UPI00036D197D
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_86_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19612..19863
DNA (252bp) protein (84aa)
ATP synthase subunit c; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit c n=1 Tax=Niabella soli DSM 19437 RepID=H1NR99_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_86_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20041..20535
DNA (495bp) protein (165aa)
ATP synthase F0 subcomplex subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP08_NIAKG
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_86_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20547..21110
DNA (564bp) protein (188aa)
ATP synthase F1 subcomplex subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP09_NIAKG
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_86_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21473..22360)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGA0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02739.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 284 in total

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