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scnpilot_solids1_trim150_scaffold_81_curated

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_81_curated_1
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(153..1259)
DNA (1107bp) protein (369aa)
Dipeptidyl aminopeptidase n=2 Tax=Bacillus RepID=U5LIA8_9BACI
dipeptidyl aminopeptidase
Dipeptidyl aminopeptidase {ECO:0000313|EMBL:AGX06362.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-14911.;"
scnpilot_solids1_trim150_scaffold_81_curated_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1319..2683)
DNA (1365bp) protein (455aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0L9_CYCMS
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AEL23935.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_81_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2715..4466)
DNA (1752bp) protein (584aa)
RagB/SusD domain protein id=5011312 bin=GWA2_Bacteroidetes_42_15 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_81_curated_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4485..7928)
DNA (3444bp) protein (1148aa)
TonB-dependent receptor plug id=2175358 bin=GWE2_Bacteroidetes_42_39 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_81_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8178..9341)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D5FD5
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_81_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9409..10002)
DNA (594bp) protein (198aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_81_curated_7
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10033..11214
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037794B2
LacI family transcriptional regulator {ECO:0000313|EMBL:GAL62735.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
LacI family transcriptional regulator; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
scnpilot_solids1_trim150_scaffold_81_curated_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11258..12454)
DNA (1197bp) protein (399aa)
Exo-alpha-sialidase; K01186 sialidase-1 [EC:3.2.1.18]
Exo-alpha-sialidase {ECO:0000313|EMBL:ACT94235.1}; EC=3.2.1.18 {ECO:0000313|EMBL:ACT94235.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Exo-alpha-sialidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5L7_DYAFD
scnpilot_solids1_trim150_scaffold_81_curated_9
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12588..13766)
DNA (1179bp) protein (393aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8); K01787 N-acylglucosamine 2-epimerase [EC:5.1.3.8]
N-acylglucosamine 2-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y403_PEDHD
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:KIA85703.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
scnpilot_solids1_trim150_scaffold_81_curated_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13869..14807)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A94C6
Uncharacterized protein {ECO:0000313|EMBL:KIC92787.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K07071
scnpilot_solids1_trim150_scaffold_81_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15265..16587
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FC872
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03560.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_81_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16831..17811
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03561.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_81_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17853..18524
DNA (672bp) protein (224aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=485918 species=
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036655F3
scnpilot_solids1_trim150_scaffold_81_curated_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18603..19175)
DNA (573bp) protein (191aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE18_NIAKG
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO44916.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RNA polymerase, sigma subunit, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_81_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19434..22283
DNA (2850bp) protein (950aa)
Excinuclease ABC, A subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE19_NIAKG
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_81_curated_16
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22336..23217)
DNA (882bp) protein (294aa)
Peptidase M56 BlaR1 n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3I9_CYCMS
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEL24628.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_81_curated_17
unknown

Not on your lists

comp(23260..23706)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003765750
hypothetical protein
scnpilot_solids1_trim150_scaffold_81_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23849..25123
DNA (1275bp) protein (425aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG
scnpilot_solids1_trim150_scaffold_81_curated_19
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25304..25963)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DZ96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AHW61314.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_81_curated_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25927..26235)
DNA (309bp) protein (103aa)
Uncharacterized protein id=3979517 bin=GWF2_Bacteroidetes_42_66 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_81_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26522..27031
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW51_DYAFD
DinB family protein
DinB family protein {ECO:0000313|EMBL:ACT93183.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_81_curated_22
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27206..28417)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037C0E4A
Sodium:proton exchanger {ECO:0000313|EMBL:KIA96864.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
sodium/hydrogen exchanger
scnpilot_solids1_trim150_scaffold_81_curated_23
unknown

Not on your lists

comp(28392..28571)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_81_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28993..29838
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003621004
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW02382.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_81_curated_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29878..30342)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381783A
Glycoside hydrolase family 13 {ECO:0000313|EMBL:KIC89958.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_81_curated_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


30665..32473
DNA (1809bp) protein (603aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
aspartyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI000376A418
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_81_curated_27
unknown

Not on your lists

32601..32804
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_81_curated_28
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32838..33290)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; D-aminoacyl-tRNA deacylase {ECO:0000256|SAAS:SAAS00160054}; D-tyrosyl-tRNA(Tyr) deacylase 1 {ECO:0000256|SAAS:SAAS00160048}; Probable D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000256|SAAS:SAAS00160053}; Probable D-tyrosyl-tRNA(Tyr) deacylase 2 {ECO:0000256|SAAS:SAAS00160044}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; C
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
Dtd protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SYS2_9FLAO
scnpilot_solids1_trim150_scaffold_81_curated_29
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

33605..38065
DNA (4461bp) protein (1487aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleotide reductase family protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B5C1_PELLD
Ribonucleotide reductase family protein {ECO:0000313|EMBL:ABB23460.1}; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM; 273)).;"
scnpilot_solids1_trim150_scaffold_81_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38251..39525
DNA (1275bp) protein (425aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK84_NIAKG
Displaying items 1-30 of 95 in total

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