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scnpilot_solids1_trim150_scaffold_450_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_450_curated_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(75..1043)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036B32EB
succinylglutamate desuccinylase; K06987
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ACU05767.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_2
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1000..1824)
DNA (825bp) protein (275aa)
Lipase/acylhydrolase family protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VGS7_9BACT
Lipase/acylhydrolase family protein {ECO:0000313|EMBL:EPR69430.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
G-D-S-L family lipolytic protein
scnpilot_solids1_trim150_scaffold_450_curated_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1891..3036)
DNA (1146bp) protein (382aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ6_PEDHD
BNR repeat-containing glycosyl hydrolase
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:ACU05774.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3182..4345)
DNA (1164bp) protein (388aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ6_PEDHD
BNR repeat-containing glycosyl hydrolase
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:ACU05774.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_5
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4369..5577)
DNA (1209bp) protein (403aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IUV3_CYCMS
glycosyl hydrolase family protein
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEL26177.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_450_curated_6
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5595..7556)
DNA (1962bp) protein (654aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000372751E
Tax=GWF2_Planctomycetes_42_9_curated
scnpilot_solids1_trim150_scaffold_450_curated_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7643..8809)
DNA (1167bp) protein (389aa)
BNR repeat-containing glycosyl hydrolase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ6_PEDHD
BNR repeat-containing glycosyl hydrolase
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:ACU05774.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_8
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(8941..9996)
DNA (1056bp) protein (352aa)
Sialidase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VIT9_9BACT
glycosyl hydrolase family protein
Tax=CG_Arma_01
scnpilot_solids1_trim150_scaffold_450_curated_9
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10138..11613)
DNA (1476bp) protein (492aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J6X3_CYCMS
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL26171.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_450_curated_10
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11645..14896)
DNA (3252bp) protein (1084aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J6X2_CYCMS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL26170.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_450_curated_11
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15045..15761
DNA (717bp) protein (239aa)
GntR domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ3_PEDHD
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ACU05771.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15869..17002)
DNA (1134bp) protein (378aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F036E
Alcohol dehydrogenase {ECO:0000313|EMBL:BAH39942.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_450_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17013..18782)
DNA (1770bp) protein (590aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ7_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05775.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(18874..20028)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E8ECA
Glycosyl hydrolase {ECO:0000313|EMBL:BAL53855.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_450_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20075..20812)
DNA (738bp) protein (246aa)
Lipolytic protein G-D-S-L family n=1 Tax=Niabella soli DSM 19437 RepID=H1NMF7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17190.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
G-D-S-L family lipolytic protein
scnpilot_solids1_trim150_scaffold_450_curated_16
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(20861..22279)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSC4_PEDHD
hypothetical protein
Tax=RBG_16_Aminicenantes_63_16_curated
scnpilot_solids1_trim150_scaffold_450_curated_17
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22340..23200)
DNA (861bp) protein (287aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366E9B9
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:ACU05772.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_18
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23309..24436)
DNA (1128bp) protein (376aa)
Exo-alpha-sialidase (EC:3.2.1.18); K01186 sialidase-1 [EC:3.2.1.18]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037EDA2C
Sialidase-1 {ECO:0000313|EMBL:EPD99626.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
scnpilot_solids1_trim150_scaffold_450_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24617..25600
DNA (984bp) protein (328aa)
erythrose 4-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Erythrose 4-phosphate dehydrogenase {ECO:0000313|EMBL:AEW02056.1}; EC=1.2.1.72 {ECO:0000313|EMBL:AEW02056.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Erythrose 4-phosphate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNX1_NIAKG
scnpilot_solids1_trim150_scaffold_450_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25635..27119)
DNA (1485bp) protein (495aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde dehydrogenase (NADP(+)) {ECO:0000313|EMBL:AEV98916.1}; EC=1.2.1.4 {ECO:0000313|EMBL:AEV98916.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aldehyde dehydrogenase (NADP(+)) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT3_NIAKG
scnpilot_solids1_trim150_scaffold_450_curated_21
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27252..28040)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1J3_HALH1
hypothetical protein; K06966
Uncharacterized protein {ECO:0000313|EMBL:AEE48537.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_450_curated_22
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28161..29456
DNA (1296bp) protein (432aa)
Natural resistance-associated macrophage protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAR4_9SPHI
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:EHQ29523.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Natural resistance-associated macrophage protein
scnpilot_solids1_trim150_scaffold_450_curated_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29657..30844)
DNA (1188bp) protein (396aa)
Amidohydrolase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN07_SOLCM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AFD09086.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_450_curated_24
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30995..32053)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D5F8F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03902.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_450_curated_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32107..33123)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374F9D4
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT92521.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_450_curated_26
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33140..34408)
DNA (1269bp) protein (423aa)
Natural resistance-associated macrophage protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8L8_PEDSD
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ADY51302.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_450_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34597..34911)
DNA (315bp) protein (105aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG60_SPILD
Glutamine--scyllo-inositol aminotransferase {ECO:0000313|EMBL:AKD55452.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
DegT/DnrJ/EryC1/StrS aminotransferase
Displaying 27 items

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