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scnpilot_solids1_trim150_scaffold_353_curated_8

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 5223..5876

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71DCF similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 208
  • Evalue 8.70e-51
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 208
  • Evalue 2.70e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU59083.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 208
  • Evalue 1.20e-50

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
TTGAAAGAAGAAAAAATACATATTGCAAAGCTTTTAAAAAATATCGTACAGAACGAAGACCAGCATTCTTTTGAAAAACTGTTTAAGATATTTTACCAGCGGTTGCTGAATTTTTGCATGTATTATATAAAGCATAAAGAATCGGCAGAAGAAATAGTGTCGGATATTTTTGTGAATTTATGGATGAAGAGAAAAGAGTTAGACCACATTAGAAACCTGGAGACCTATCTTTTTATTTCGGTTAAAAATCATTCGCTCAATCACATCAAACAATTCTCCAATTACCGTGTTACTTACCTTGAAGACGGCGGTATTCATGCACTCGTAAATACCAGCGATCCTGAAAAGGAATTAGAGAGGAGAGAACTTATTTTCAAAATGGATGAGGCGGTCAATTCTTTGCCACCTCAATGCAAAATAATTTTCAACCTCATCAAAGAGGAAGGATTAAAATATAAAGAAGTAGCAGAAATATTGAACCTGTCTCCGCGTACCGTTGAAACCCAGTTGGTACGGGCTATGAAAAAGCTGGACAAAATTCTCACACCTTATCTTTCTTCTTCACGGCAAAGGCATCCAAAAGATAAGATCAAAGCGTTGCCTTTGATCCGGTCAATTCTTTTTTCCATTATTTTTTTTCTGGCTTGTAAGTAA
PROTEIN sequence
Length: 218
LKEEKIHIAKLLKNIVQNEDQHSFEKLFKIFYQRLLNFCMYYIKHKESAEEIVSDIFVNLWMKRKELDHIRNLETYLFISVKNHSLNHIKQFSNYRVTYLEDGGIHALVNTSDPEKELERRELIFKMDEAVNSLPPQCKIIFNLIKEEGLKYKEVAEILNLSPRTVETQLVRAMKKLDKILTPYLSSSRQRHPKDKIKALPLIRSILFSIIFFLACK*