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scnpilot_solids1_trim150_scaffold_353_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_353_curated_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72509.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(352..1191)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367289D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02826.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids1_trim150_scaffold_353_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1218..2045)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E0832
Uncharacterized protein {ECO:0000313|EMBL:KIC91723.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09134 hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2107..2907)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371B5E7
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_353_curated_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3061..4248)
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=2 Tax=Myroides RepID=H1ZBS8_MYROD
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADY51209.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_353_curated_6
unknown

Not on your lists

comp(4299..4553)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_353_curated_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4616..4921)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFF8_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48304.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_353_curated_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5223..5876
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71DCF
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU59083.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_353_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5928..7034
DNA (1107bp) protein (369aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B362AD
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU64583.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_353_curated_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7285..10596
DNA (3312bp) protein (1104aa)
TonB-dependent receptor plug n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFC8_CHIPD
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO41135.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_353_curated_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10609..12219
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E976_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO41134.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_353_curated_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12274..13140
DNA (867bp) protein (289aa)
Cell surface protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E977_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO41133.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PKD domain-containing protein
scnpilot_solids1_trim150_scaffold_353_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13593..14786
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJT9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14106.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14791..15726
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369AD44
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_353_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15854..16441
DNA (588bp) protein (196aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NRR7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17794.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_solids1_trim150_scaffold_353_curated_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17059..18150
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HHK7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ21429.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_353_curated_17
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18248..21718
DNA (3471bp) protein (1157aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0S0_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI40319.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_18
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21738..23561
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RFM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53983.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_19
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23582..24811
DNA (1230bp) protein (410aa)
Uncharacterized protein id=3725193 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids1_trim150_scaffold_353_curated_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24965..26845
DNA (1881bp) protein (627aa)
hypothetical protein; K05970 sialate O-acetylesterase [EC:3.1.1.53]
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMY6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55264.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
scnpilot_solids1_trim150_scaffold_353_curated_21
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27184..30096
DNA (2913bp) protein (971aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000379FD4A
Uncharacterized protein {ECO:0000313|EMBL:KIA89464.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_353_curated_22
unknown

Not on your lists

comp(30116..30238)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_353_curated_23
unknown

Not on your lists

comp(30238..30477)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_353_curated_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30659..31261)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361A715
putative HD superfamily hydrolase
Putative HD superfamily hydrolase {ECO:0000313|EMBL:AFD06293.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_353_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31310..31924)
DNA (615bp) protein (205aa)
Nitroreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFJ0_NIAKG
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEV98421.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_353_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32072..32653)
DNA (582bp) protein (194aa)
tRNA guanosine-2'-O-methyltransferase; K00556 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
tRNA guanosine-2'-O-methyltransferase {ECO:0000313|EMBL:AEV97557.1}; EC=2.1.1.34 {ECO:0000313|EMBL:AEV97557.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
tRNA guanosine-2'-O-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ40_NIAKG
scnpilot_solids1_trim150_scaffold_353_curated_27
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32945..34390
DNA (1446bp) protein (482aa)
FeS assembly protein SufB n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2M8_PEDHD
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:ETZ23616.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
scnpilot_solids1_trim150_scaffold_353_curated_28
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34463..35227
DNA (765bp) protein (255aa)
FeS assembly ATPase SufC n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2M7_PEDHD
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:ACU05237.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_353_curated_29
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35277..36719
DNA (1443bp) protein (481aa)
FeS assembly protein SufD n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2M6_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23614.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
scnpilot_solids1_trim150_scaffold_353_curated_30
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36753..37994
DNA (1242bp) protein (414aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EE98_9SPHI
Displaying items 1-30 of 38 in total

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