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scnpilot_solids1_trim150_scaffold_3395_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3395_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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142..1515
DNA (1374bp) protein (458aa)
DNA repair protein radA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNI1_9SPHN
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
scnpilot_solids1_trim150_scaffold_3395_curated_2
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1658..2233
DNA (576bp) protein (192aa)
Colicin V production protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UN75_9SPHN
colicin V production protein; K03558 membrane protein required for colicin V production
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_3395_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2230..2655
DNA (426bp) protein (142aa)
Fe-S cluster formation protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8Y0_9SPHN
Fe-S cluster formation protein {ECO:0000313|EMBL:ENY79906.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Fe-S cluster formation protein
scnpilot_solids1_trim150_scaffold_3395_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2994..4538
DNA (1545bp) protein (515aa)
Sodium/hydrogen exchanger n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VX94_9SPHN
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ENY79907.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family
scnpilot_solids1_trim150_scaffold_3395_curated_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4567..5673)
DNA (1107bp) protein (369aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W853_9SPHN
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_3395_curated_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5661..6266)
DNA (606bp) protein (202aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GS61_SPHAL
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_3395_curated_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6287..6484
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 7 items

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