ggKbase home page

scnpilot_solids1_trim150_scaffold_6687_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_6687_curated_1
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415..960
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCB19
Uncharacterized protein {ECO:0000313|EMBL:EXS68125.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_6687_curated_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

963..1370
DNA (408bp) protein (136aa)
Putative metal-binding protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WAF4_9SPHN
Metal-binding protein {ECO:0000313|EMBL:KFD29275.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_6687_curated_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1367..2383
DNA (1017bp) protein (339aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
UPI0003D62B83 related cluster n=1 Tax=unknown RepID=UPI0003D62B83
scnpilot_solids1_trim150_scaffold_6687_curated_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2380..2949
DNA (570bp) protein (190aa)
Phosphoglycerate/bisphosphoglycerate mutase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NDS2_9SPHN
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:KGB52613.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
phosphoglycerate/bisphosphoglycerate mutase
scnpilot_solids1_trim150_scaffold_6687_curated_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2946..3668
DNA (723bp) protein (241aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWA7_9SPHN
scnpilot_solids1_trim150_scaffold_6687_curated_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3665..3877
DNA (213bp) protein (71aa)
aminotransferase (EC:2.6.1.-); K02225 cobalamin biosynthetic protein CobC
UPI0003D5FAB8 related cluster n=1 Tax=unknown RepID=UPI0003D5FAB8
Aminotransferase, class I and II {ECO:0000313|EMBL:KGB52615.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Displaying 6 items

View Taxonomy