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scnpilot_solids1_trim150_scaffold_5793_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5793_curated_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..530)
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL6_SPHAL
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
scnpilot_solids1_trim150_scaffold_5793_curated_2
Sphingopyxis soli, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(530..934)
DNA (405bp) protein (135aa)
30S ribosomal protein S8 n=2 Tax=Sphingopyxis RepID=I0IWA4_SPHMC
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=592051 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis soli.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_solids1_trim150_scaffold_5793_curated_3
Sphingopyxis panaciterrulae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(947..1252)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Sphingopyxis panaciterrulae RepID=I0IW67_9SPHN
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=462372 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis panaciterrulae.;"
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_solids1_trim150_scaffold_5793_curated_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1303..1881)
DNA (579bp) protein (193aa)
50S ribosomal protein L5 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL5_SPHAL
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_5793_curated_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1874..2194)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=2 Tax=Sphingopyxis RepID=I0IWB1_9SPHN
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_5793_curated_6
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2197..2565)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL14_SPHAL
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_5793_curated_7
Sphingopyxis panaciterrulae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2623..2916)
DNA (294bp) protein (98aa)
30S ribosomal protein S17 n=1 Tax=Sphingopyxis panaciterrulae RepID=I0IW65_9SPHN
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=462372 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis panaciterrulae.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_solids1_trim150_scaffold_5793_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3139..3570)
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW10_9SPHN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
scnpilot_solids1_trim150_scaffold_5793_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3582..4295)
DNA (714bp) protein (238aa)
30S ribosomal protein S3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF4_9SPHN
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Displaying 9 items

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