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scnpilot_solids1_trim150_scaffold_5793_curated_1

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3..530)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RL6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 336
  • Evalue 1.70e-89
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 176.0
  • Bit_score: 338
  • Evalue 4.90e-90
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 336
  • Evalue 5.40e-90

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTCTCGCATCGGTAAAAGGGCAGTCGAGATTCCCAGCGGCGTCACCGCCGCGATCGATGGCGGCACGCTGTCGGTCAAGGGTCCCAAGGGCACGCTGGCGATGCCGCTGTCCGACATCATCAAATATGAGGTCGGCGAAGGCAGCATTTCGGTGCAGCCGGCGAACGACAGCCGCGAAGCGCGGGCCTTCTGGGGCATGCAGCGCACGCTGGTCCAGAATCTGGTCACGGGCGTGACCGAGGGCTTCACCAAGGTTCTCGAGATCACCGGCGTCGGCTATCGCGCCAATGCGCAGGGCAAGAATCTGAAGCTGAACCTCGGCTACAGCCACGATGTCGACTATGCGGTGCCCGAGGGCATCGAGATCAAGACGCCGGACAACACGACGATCGAGATCAGCGGCATCGACAAGCAGAAGGTCGGCCAGGTCGCGGCGGAGATCCGTCGCTGGCGCAAGCCCGAACCCTACAAGGGCAAGGGCATCAAGTATCGCGGCGAGTACATCTTCCGCAAAGAAGGCAAGAAG
PROTEIN sequence
Length: 176
MSRIGKRAVEIPSGVTAAIDGGTLSVKGPKGTLAMPLSDIIKYEVGEGSISVQPANDSREARAFWGMQRTLVQNLVTGVTEGFTKVLEITGVGYRANAQGKNLKLNLGYSHDVDYAVPEGIEIKTPDNTTIEISGIDKQKVGQVAAEIRRWRKPEPYKGKGIKYRGEYIFRKEGKK