ggKbase home page

scnpilot_solids1_trim150_scaffold_7255_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_7255_curated_1
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
Helicase c2 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT94_SPHAL
Helicase c2 {ECO:0000313|EMBL:KGB51472.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
scnpilot_solids1_trim150_scaffold_7255_curated_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(663..1028)
DNA (366bp) protein (122aa)
Type IV pilus assembly PilZ n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVY9_SPHAL
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF52183.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_7255_curated_3
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1253..1738)
DNA (486bp) protein (162aa)
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
scnpilot_solids1_trim150_scaffold_7255_curated_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871..2950
DNA (1080bp) protein (360aa)
lysK; lysyl-tRNA synthetase; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
Lysine--tRNA ligase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVY8_SPHAL
scnpilot_solids1_trim150_scaffold_7255_curated_5
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2980..3459
DNA (480bp) protein (160aa)
asparaginase; K01424 L-asparaginase [EC:3.5.1.1]
Asparaginase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVY7_SPHAL
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_7255_curated_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3480..3584)
DNA (105bp) protein (35aa)
Fatty acid desaturase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVY6_SPHAL
Fatty acid desaturase {ECO:0000313|EMBL:KGB52725.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
fatty acid desaturase
Displaying 6 items

View Taxonomy