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scnpilot_solids1_trim150_scaffold_8975_curated_3

Organism: solids_Sphingopyxis_2

partial RP 29 / 55 BSCG 30 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 593..982

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM4_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 128.0
  • Bit_score: 206
  • Evalue 1.50e-50
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 128.0
  • Bit_score: 212
  • Evalue 3.00e-52
Iojap-related protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 128.0
  • Bit_score: 206
  • Evalue 4.80e-51

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
TTGACTGCACCTTCCACCGCCCCGCAACCGACCGACCCCGACACGGTGGCGGCGCTGCACCGGCTGATCATGGACTCGCTCGACGACGACCAGGCGGTCGATGCCATTTCGATCCCGCTGGAGGGCAAGAGCAGCATCGCCGACCATATGGTGATCGCCAGCGGCCGTTCGACGCGCCACGTCTCGGCGATCGCCGACAAGCTGGCGCAGCGCATCAAGCAGGAAGCGGGCCGCACCGTCCGCGTCGAGGGACTGCCCAACGCCGACTGGGTGCTGATCGACGCCGGCGACGTGATCGTCCACCTGTTCCGGCCGGAGGTGCGGAGCTTCTACAACCTCGAACGCATGTGGTCGTTCGGCGACGCCCCGCCCGCCGCCGCCGCGAATTGA
PROTEIN sequence
Length: 130
LTAPSTAPQPTDPDTVAALHRLIMDSLDDDQAVDAISIPLEGKSSIADHMVIASGRSTRHVSAIADKLAQRIKQEAGRTVRVEGLPNADWVLIDAGDVIVHLFRPEVRSFYNLERMWSFGDAPPAAAAN*