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scnpilot_solids1_trim150_scaffold_8975_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_8975_curated_1
unknown

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comp(1..141)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_8975_curated_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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260..583
DNA (324bp) protein (108aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S255_9SPHN
scnpilot_solids1_trim150_scaffold_8975_curated_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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593..982
DNA (390bp) protein (130aa)
Ribosomal silencing factor RsfS n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM4_SPHAL
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
Iojap-related protein; K09710 ribosome-associated protein
scnpilot_solids1_trim150_scaffold_8975_curated_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1051..1554
DNA (504bp) protein (168aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RLMH_SPHAL
scnpilot_solids1_trim150_scaffold_8975_curated_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1551..2765
DNA (1215bp) protein (405aa)
Peptidase M23B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXS0_9SPHN
Peptidase M23B {ECO:0000313|EMBL:KGB58982.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
peptidase M23B
scnpilot_solids1_trim150_scaffold_8975_curated_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2852..3118
DNA (267bp) protein (89aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM7_SPHAL
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying 6 items

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