ggKbase home page

scnpilot_solids1_trim150_scaffold_1088_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1088_curated_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..89
DNA (87bp) protein (29aa)
TonB-dependent receptor n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP95_PSEUU
TonB-dependent receptor {ECO:0000313|EMBL:ADV26068.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1088_curated_2
unknown

Not on your lists

205..3003
DNA (2799bp) protein (933aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1088_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3174..5522
DNA (2349bp) protein (783aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
Glycosyl hydrolase family 20, catalytic domain n=1 Tax=uncultured organism RepID=T1WBX3_9ZZZZ
Stenotrophomonas maltophilia strain ZBG7B contig_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85229.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_1088_curated_4
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5581..6828)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E6E54D
Uncharacterized protein {ECO:0000313|EMBL:GAJ41550.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1088_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6916..9216
DNA (2301bp) protein (767aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP94_PSEUU
Beta-hexosaminidase {ECO:0000313|EMBL:AKC86521.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1088_curated_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9283..9648)
DNA (366bp) protein (122aa)
Mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUN8_9GAMM
mannose-6-phosphate isomerase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1088_curated_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9960..10373)
DNA (414bp) protein (138aa)
VanZ like family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8Z2_9GAMM
Membrane protein {ECO:0000313|EMBL:KDE89481.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1088_curated_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10370..11554)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000317E4D1
Uncharacterized protein {ECO:0000313|EMBL:EZP46674.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1088_curated_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11609..12346
DNA (738bp) protein (246aa)
pteridine reductase; K03793 pteridine reductase [EC:1.5.1.33]
pteridine reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EF18F6
Pteridine reductase {ECO:0000313|EMBL:AHY57691.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_1088_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12439..12927)
DNA (489bp) protein (163aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Xanthomonas axonopodis RepID=UPI00030BBD8C
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AHY57690.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
scnpilot_solids1_trim150_scaffold_1088_curated_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13049..14569)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V9B6_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP79156.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative histidine sensor kinase/response regulator fusion protein
scnpilot_solids1_trim150_scaffold_1088_curated_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14576..15016)
DNA (441bp) protein (147aa)
Two-component system response regulator n=4 Tax=Xanthomonas campestris RepID=B0RNR6_XANCB
two-component system regulatory protein; K02485 two-component system, unclassified family, response regulator
Two-component system response regulator protein {ECO:0000313|EMBL:AEL08635.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_1088_curated_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..16431)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Two-component system sensor protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8Y5_9GAMM
multi-sensor signal transduction histidine kinase
Displaying 13 items

View Taxonomy