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scnpilot_solids1_trim150_scaffold_69_curated

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_69_curated_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..126
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741CB7
Integrase {ECO:0000313|EMBL:AJC46516.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_69_curated_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216..2387
DNA (2172bp) protein (724aa)
bglX; Beta-glucosidase (EC:3.2.1.21); K05349 beta-glucosidase [EC:3.2.1.21]
beta-glucosidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003112D5F
Beta-glucosidase {ECO:0000313|EMBL:KDE90984.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_69_curated_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2487..2981
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00035E4272
Uncharacterized protein {ECO:0000313|EMBL:AJC46883.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_69_curated_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3041..4186)
DNA (1146bp) protein (382aa)
dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DC8B79
Glucose dehydrogenase {ECO:0000313|EMBL:AHY60562.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
PQQ-dependent oxidoreductase, gdhB family
scnpilot_solids1_trim150_scaffold_69_curated_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4273..5541)
DNA (1269bp) protein (423aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW27_9GAMM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:KGM54883.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Na+/H+ dicarboxylate symporter
scnpilot_solids1_trim150_scaffold_69_curated_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5724..6512)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F62901
Uncharacterized protein {ECO:0000313|EMBL:AHY60558.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Gll0911 protein
scnpilot_solids1_trim150_scaffold_69_curated_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6530..7384)
DNA (855bp) protein (285aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036DBA4E
Transcriptional regulator {ECO:0000313|EMBL:AHY60557.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
RpiR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_69_curated_8
unknown

Not on your lists

comp(7369..8259)
DNA (891bp) protein (297aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_69_curated_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8256..9353)
DNA (1098bp) protein (366aa)
L-alanine-DL-glutamate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003032748
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:AHY60556.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative chloromuconate cycloisomerase
scnpilot_solids1_trim150_scaffold_69_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9350..10798)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003731B9A
Uncharacterized protein {ECO:0000313|EMBL:AHY60555.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
NLP/P60 protein
scnpilot_solids1_trim150_scaffold_69_curated_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10982..12409
DNA (1428bp) protein (476aa)
transglutaminase, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003737108
Transglutaminase {ECO:0000313|EMBL:AKC87121.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
transglutaminase
scnpilot_solids1_trim150_scaffold_69_curated_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..15476
DNA (3018bp) protein (1006aa)
TonB-dependent receptor plug n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVW1_PSEUU
Energy transducer TonB {ECO:0000313|EMBL:KGM52201.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
TonB-dependent receptor plug
scnpilot_solids1_trim150_scaffold_69_curated_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15572..16852
DNA (1281bp) protein (427aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036F6185
diaminopimelate decarboxylase
scnpilot_solids1_trim150_scaffold_69_curated_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16849..17679
DNA (831bp) protein (277aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW40_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHX14185.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
N-acetylmuramoyl-L-alanine amidase
scnpilot_solids1_trim150_scaffold_69_curated_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17697..19253
DNA (1557bp) protein (519aa)
penicillin-binding protein 4 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DDFC86
Penicillin-binding protein {ECO:0000313|EMBL:AHY60551.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
beta-lactamase
scnpilot_solids1_trim150_scaffold_69_curated_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19779..22667
DNA (2889bp) protein (963aa)
Putative TonB dependent receptor n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWS2_PSEUP
TonB-dependent receptor {ECO:0000313|EMBL:KGM54884.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative TonB dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_69_curated_17
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22811..23569
DNA (759bp) protein (253aa)
ampD; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGP6_XANCT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ELQ17255.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
scnpilot_solids1_trim150_scaffold_69_curated_18
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

23628..25667
DNA (2040bp) protein (680aa)
sugar phosphate isomerase id=24398892 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Aminicenantes_62_12_curated
scnpilot_solids1_trim150_scaffold_69_curated_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25689..26393
DNA (705bp) protein (235aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
vanX; hypothetical protein; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22]
D-alanyl-D-alanine dipeptidase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A347
scnpilot_solids1_trim150_scaffold_69_curated_20
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26520..26900
DNA (381bp) protein (127aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGL1_XANCT
Putative transmembrane protein {ECO:0000313|EMBL:ELQ17220.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_69_curated_21
Necator americanus, Necator, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

27124..27462
DNA (339bp) protein (113aa)
calcium-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306984D
EF hand {ECO:0000313|EMBL:ETN72382.1}; TaxID=51031 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;" source="Necator americanus (Human hookworm).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_69_curated_22
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27548..28297
DNA (750bp) protein (250aa)
Putative hydrolase of the HAD superfamily n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T477_XANCT
Putative hydrolase of the HAD superfamily {ECO:0000313|EMBL:CCP41933.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
scnpilot_solids1_trim150_scaffold_69_curated_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28294..28866
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D67A23
Uncharacterized protein {ECO:0000313|EMBL:AHY60545.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_69_curated_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28920..30356
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UPY8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77995.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_69_curated_25
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31181..32431)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY4_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EYR69773.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_69_curated_26
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32428..33687)
DNA (1260bp) protein (420aa)
Membrane-fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY5_9GAMM
Membrane protein {ECO:0000313|EMBL:EYR69774.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
membrane-fusion protein
scnpilot_solids1_trim150_scaffold_69_curated_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33684..34670)
DNA (987bp) protein (329aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR69882.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
membrane-fusion protein
scnpilot_solids1_trim150_scaffold_69_curated_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34667..35653)
DNA (987bp) protein (329aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR69883.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
multidrug resistance efflux pump-like protein
scnpilot_solids1_trim150_scaffold_69_curated_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35634..36311)
DNA (678bp) protein (226aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034770D6
ABC transporter {ECO:0000313|EMBL:EYR69775.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_69_curated_30
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37151..40270)
DNA (3120bp) protein (1040aa)
acriflavin resistance protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000372AFE0
Acriflavin resistance protein {ECO:0000313|EMBL:AJC46978.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Displaying items 1-30 of 93 in total

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