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scnpilot_solids1_trim150_scaffold_1322_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1322_curated_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1176
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000361193E
Uncharacterized protein {ECO:0000313|EMBL:AHY58667.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1322_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1737..2297
DNA (561bp) protein (187aa)
Cytochrome b561 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILK3_9SPHN
cytochrome b561
Cytochrome b561 {ECO:0000313|EMBL:BAK67596.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_1322_curated_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2544..3140)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031FB0B8
Electron transporter SenC {ECO:0000313|EMBL:AKC88211.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
electron transporter SCO1/SenC; K07152
scnpilot_solids1_trim150_scaffold_1322_curated_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3137..3904)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPG9_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC86363.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1322_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3919..4992)
DNA (1074bp) protein (358aa)
nitrite reductase, copper-containing (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
nitrite reductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F75F79
Nitrite reductase {ECO:0000313|EMBL:AKC86362.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1322_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5178..6404)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPH2_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26216.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1322_curated_7
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6401..6661)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPH3_PSEUU
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1322_curated_8
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6658..7068)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000313AC48
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1322_curated_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7065..8294)
DNA (1230bp) protein (410aa)
NnrS family protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPH6_PSEUU
NnrS family protein; K07234 uncharacterized protein involved in response to NO
NnrS family protein {ECO:0000313|EMBL:ADV26220.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1322_curated_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8605..10881)
DNA (2277bp) protein (759aa)
nitric-oxide reductase; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
nitric oxide reductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003047D08
Nitric oxide reductase large subunit {ECO:0000313|EMBL:AKC86351.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1322_curated_11
unknown

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10938..11114
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1322_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11843..12598)
DNA (756bp) protein (252aa)
transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FEC27F
Transcriptional regulator {ECO:0000313|EMBL:AKC86350.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
scnpilot_solids1_trim150_scaffold_1322_curated_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12618..14015)
DNA (1398bp) protein (466aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
coproporphyrinogen III oxidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E97EBC
Displaying 13 items

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