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scnpilot_solids1_trim150_scaffold_255_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_255_curated_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..96
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741CB7
Integrase {ECO:0000313|EMBL:AJC46516.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_255_curated_2
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93..1355)
DNA (1263bp) protein (421aa)
Regulator of arylsulfatase activity n=1 Tax=Thauera sp. 28 RepID=N6ZID8_9RHOO
Sulfatase maturase {ECO:0000313|EMBL:KER63132.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
radical SAM protein; K06871 uncharacterized protein
scnpilot_solids1_trim150_scaffold_255_curated_3
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1490..3112)
DNA (1623bp) protein (541aa)
arylsulfatase; K01130 arylsulfatase [EC:3.1.6.1]
arylsulfatase n=1 Tax=Aeromonas sp. MDS8 RepID=UPI00036CA059
Arylsulfatase {ECO:0000313|EMBL:KER63133.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
scnpilot_solids1_trim150_scaffold_255_curated_4
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3677..3919)
DNA (243bp) protein (81aa)
malic enzyme (EC:1.1.1.40 2.3.1.8); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Malic enzyme {ECO:0000313|EMBL:ETE30638.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ETE30638.1};; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa 32.;"
Malate dehydrogenase (Oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase n=2 Tax=Xylella fastidiosa RepID=Q3RB29_XYLFS
scnpilot_solids1_trim150_scaffold_255_curated_5
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..6143
DNA (1803bp) protein (601aa)
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97516.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KIQ97516.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
ggt; gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UN84_9SPHN
scnpilot_solids1_trim150_scaffold_255_curated_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6130..7374
DNA (1245bp) protein (415aa)
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICX3_9SPHN
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_255_curated_7
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7428..8333
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNJ9_9SPHN
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97518.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_255_curated_8
Pseudomonas sp. GM33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8342..9583)
DNA (1242bp) protein (414aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; Flags: Precursor;; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM33.;"
alr; alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Pseudomonas sp. GM33 RepID=J3FRQ6_9PSED
scnpilot_solids1_trim150_scaffold_255_curated_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9630..12500)
DNA (2871bp) protein (957aa)
Putative TonB dependent receptor n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWS2_PSEUP
TonB-dependent receptor {ECO:0000313|EMBL:KGM54884.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative TonB dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_255_curated_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12568..13677)
DNA (1110bp) protein (370aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4NHX3_9GAMM
Beta-lactamase {ECO:0000313|EMBL:AKC87711.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids1_trim150_scaffold_255_curated_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14147..15421)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K234_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMI48625.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
scnpilot_solids1_trim150_scaffold_255_curated_12
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15487..16800
DNA (1314bp) protein (438aa)
periplasmic protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AZK8_9CAUL
Carboxyl-terminal protease {ECO:0000313|EMBL:GAD60128.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
scnpilot_solids1_trim150_scaffold_255_curated_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16905..18002)
DNA (1098bp) protein (366aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ribosome-associated GTPase (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
GTPase RsgA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E9A29
scnpilot_solids1_trim150_scaffold_255_curated_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18132..19403
DNA (1272bp) protein (424aa)
aspartate transaminase (EC:2.6.1.1); K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036EBF0B
Aminotransferase {ECO:0000313|EMBL:AHY57763.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_255_curated_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19413..20063
DNA (651bp) protein (217aa)
Lysophospholipase L1 and related esterases n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSM8_STEMA
Lysophospholipase L1 and related esterases
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CCH14070.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_255_curated_16
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20087..20758
DNA (672bp) protein (224aa)
Putative methyltransferase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZN7_XANCT
Putative methyltransferase {ECO:0000313|EMBL:EKU24170.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_17
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20836..21165
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SY30_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39706.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21209..22465)
DNA (1257bp) protein (419aa)
RNA helicase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037855EE
RNA helicase {ECO:0000313|EMBL:AJC46963.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
DEAD/DEAH box helicase
scnpilot_solids1_trim150_scaffold_255_curated_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22506..23285)
DNA (780bp) protein (260aa)
acetylxylan esterase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003721B77
Acetyl xylan esterase {ECO:0000313|EMBL:AJC47201.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
acetylxylan esterase
scnpilot_solids1_trim150_scaffold_255_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23347..24273
DNA (927bp) protein (309aa)
glutaredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000315A1AC
Glutaredoxin 3 {ECO:0000313|EMBL:CCP17861.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
glutaredoxin-like protein; K07390 monothiol glutaredoxin
scnpilot_solids1_trim150_scaffold_255_curated_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24388..24927)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KNL7_STEMA
Uncharacterized protein {ECO:0000313|EMBL:AHY57757.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25127..26536
DNA (1410bp) protein (470aa)
amidohydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E8FAFA
Stenotrophomonas maltophilia strain ZBG7B contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86232.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26533..27798
DNA (1266bp) protein (422aa)
amidohydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F4501D
Amidohydrolase {ECO:0000313|EMBL:AHY57753.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27926..28870
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037137E3
Uncharacterized protein {ECO:0000313|EMBL:KDE91729.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative DegV family transcriptional regulator
scnpilot_solids1_trim150_scaffold_255_curated_25
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28941..29279
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4E4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25820.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_255_curated_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29280..29966
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB5A5E
ATP-binding domain-containing protein {ECO:0000313|EMBL:AKC86979.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein; K06927
scnpilot_solids1_trim150_scaffold_255_curated_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30368..31804)
DNA (1437bp) protein (479aa)
Diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2N8_STEMA
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEM52737.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_255_curated_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31901..32731)
DNA (831bp) protein (277aa)
S-formylglutathione hydrolase (EC:3.1.2.12); K01070 S-formylglutathione hydrolase [EC:3.1.2.12]
S-formylglutathione hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA08CC
Stenotrophomonas maltophilia strain ZBG7B contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86240.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_255_curated_29
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32785..33894)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
adhC; S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3N6_9GAMM
scnpilot_solids1_trim150_scaffold_255_curated_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34031..34306)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:AHY57736.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
Displaying items 1-30 of 51 in total

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