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scnpilot_solids1_trim150_scaffold_241_curated

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_241_curated_1
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1908)
DNA (1908bp) protein (636aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKS7_AZOSU
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AEV25532.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
scnpilot_solids1_trim150_scaffold_241_curated_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..3154)
DNA (1236bp) protein (412aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKS6_AZOSU
acetyl/propionyl-CoA carboxylase, alpha subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:AEV25531.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
scnpilot_solids1_trim150_scaffold_241_curated_3
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3151..4401)
DNA (1251bp) protein (417aa)
Putative cation efflux system protein id=2988948 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
outer membrane protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_solids1_trim150_scaffold_241_curated_4
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..4839)
DNA (372bp) protein (124aa)
Uncharacterized protein id=2988950 bin=GWF1_Xanthomonadales_69_6 species=Stenotrophomonas maltophilia genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_solids1_trim150_scaffold_241_curated_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4915..5226)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVD8_STEMA
Copper-sensing transcriptional repressor csoR {ECO:0000313|EMBL:EZP46411.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5241..6194
DNA (954bp) protein (318aa)
Cation transporter n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KF28_STEMA
Cation transporter {ECO:0000313|EMBL:EQM75447.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
putative transmembrane transporter
scnpilot_solids1_trim150_scaffold_241_curated_7
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6207..6623)
DNA (417bp) protein (139aa)
membrane protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F0B159
Putative transmembrane protein {ECO:0000313|EMBL:EZP68067.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_8
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7031..7327
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PCR9_XYLFA
hypothetical protein; K07334 proteic killer suppression protein
Uncharacterized protein {ECO:0000313|EMBL:AAF84518.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids1_trim150_scaffold_241_curated_9
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7344..8459
DNA (1116bp) protein (372aa)
Helix-turn-helix motif n=1 Tax=Xylella fastidiosa Dixon RepID=Q3RE31_XYLFS
Helix-turn-helix motif {ECO:0000313|EMBL:EAO12919.1}; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_10
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..8951
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa Dixon RepID=Q3RE30_XYLFS
Uncharacterized protein {ECO:0000313|EMBL:EAO12920.1}; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_11
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9058..10158
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D061
Uncharacterized protein {ECO:0000313|EMBL:KIN90200.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_12
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10158..11330
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q5NV28_RALME
Uncharacterized protein {ECO:0000313|EMBL:ETY84350.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_13
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11327..12616
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036A2780
phage integrase family site-specific recombinase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_241_curated_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12642..15638
DNA (2997bp) protein (999aa)
Tn5044 transposase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNQ1_STEMA
Transposase {ECO:0000313|EMBL:KGM53249.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
tnpA; Tn5044 transposase
scnpilot_solids1_trim150_scaffold_241_curated_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15717..16226)
DNA (510bp) protein (170aa)
copper homeostasis protein CutC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F8466
Copper homeostasis protein CutC {ECO:0000313|EMBL:AHY59197.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
copper homeostasis protein cutC; K06201 copper homeostasis protein
scnpilot_solids1_trim150_scaffold_241_curated_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16223..17227)
DNA (1005bp) protein (335aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (EC:3.5.1.26); K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031AAFD2
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:AHY59198.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_241_curated_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17224..18264)
DNA (1041bp) protein (347aa)
glucokinase (EC:2.7.1.2)
glucokinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003049AB6
Glucokinase {ECO:0000313|EMBL:AHY59199.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_241_curated_18
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18318..18704)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DYZ6_9BURK
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
CrcB protein; K06199 CrcB protein
scnpilot_solids1_trim150_scaffold_241_curated_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18773..20077)
DNA (1305bp) protein (435aa)
ATPase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CE62_XANCA
Recombination factor protein RarA {ECO:0000313|EMBL:AKC88024.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
ATPase; K07478 putative ATPase
scnpilot_solids1_trim150_scaffold_241_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20218..20856)
DNA (639bp) protein (213aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7435A
lolA; Outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_241_curated_21
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20960..22879)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HBF3_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ15375.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
Transglutaminase-like enzymes, putative cysteine proteases
scnpilot_solids1_trim150_scaffold_241_curated_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22912..25269)
DNA (2358bp) protein (786aa)
Cell division protein FtsK n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RT40_XANCB
Cell division protein FtsK {ECO:0000313|EMBL:AHY59044.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_solids1_trim150_scaffold_241_curated_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25513..26535
DNA (1023bp) protein (341aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7E1_STEMA
scnpilot_solids1_trim150_scaffold_241_curated_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26560..27453
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZTX9_9GAMM
hypothetical protein; K07098
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids1_trim150_scaffold_241_curated_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27450..28595
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003803447
Uncharacterized protein {ECO:0000313|EMBL:AHY59046.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09919 hypothetical protein
scnpilot_solids1_trim150_scaffold_241_curated_26
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28975..29532)
DNA (558bp) protein (186aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I7J3D1_PSEPS
alkylhydroperoxidase like protein, ahpd family
scnpilot_solids1_trim150_scaffold_241_curated_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29634..30476
DNA (843bp) protein (281aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPN4_9BURK
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EHR72032.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
DNA-binding domain-containing protein
scnpilot_solids1_trim150_scaffold_241_curated_28
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31255..32013
DNA (759bp) protein (253aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E7EC9
scnpilot_solids1_trim150_scaffold_241_curated_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32101..32319
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=11 Tax=Stenotrophomonas RepID=B2FQX9_STRMK
infA; Translation initiation factor 1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_241_curated_30
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32449..34728)
DNA (2280bp) protein (760aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003772D1D
Clp protease ClpX {ECO:0000313|EMBL:AHY59051.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
clpA; putative ATP-dependent Clp protease ATP-binding subunit; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
Displaying items 1-30 of 57 in total

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