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scnpilot_solids1_trim150_scaffold_331_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_331_curated_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..973
DNA (972bp) protein (324aa)
ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:CCH14211.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
ATP synthase subunit beta n=2 Tax=Stenotrophomonas RepID=B8L8R2_9GAMM
scnpilot_solids1_trim150_scaffold_331_curated_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1057..1479
DNA (423bp) protein (141aa)
atpC; ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DF01AC
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_331_curated_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..1998)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SVS0_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ16110.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_331_curated_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2276..3643
DNA (1368bp) protein (456aa)
glmU; bifunctional protein glmu [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate N-acetyltransferase) (EC:2.7.7.23 2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037055C9
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_solids1_trim150_scaffold_331_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3813..5189)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Two component system sensor histidine kinase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TXP3_STEMA
putative two component system sensor histidine kinase
scnpilot_solids1_trim150_scaffold_331_curated_6
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..6510)
DNA (1341bp) protein (447aa)
histidine kinase n=3 Tax=Xanthomonas axonopodis RepID=UPI00037F93E0
Histidine kinase {ECO:0000313|EMBL:KHS07040.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
atoC; Two-component system regulatory protein
scnpilot_solids1_trim150_scaffold_331_curated_7
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6553..7767)
DNA (1215bp) protein (405aa)
ABC transporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVB8_PSEUP
ABC transporter
ABC transporter {ECO:0000313|EMBL:AER57579.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_331_curated_8
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..9113)
DNA (1335bp) protein (445aa)
ABC transporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVB7_PSEUP
ABC transporter
ABC transporter {ECO:0000313|EMBL:AER57578.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_331_curated_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9110..9592)
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Xanthomonas citri group RepID=H8FCS4_XANCI
Uncharacterized protein {ECO:0000313|EMBL:AKC87186.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_331_curated_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9612..10829)
DNA (1218bp) protein (406aa)
ABC transporter permease n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UQG5_XANC8
ybjZ; ABC transporter permease; K02004 putative ABC transport system permease protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_331_curated_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10844..12157)
DNA (1314bp) protein (438aa)
ABC transporter ATP-binding protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000376A366
hypothetical protein; K02004 putative ABC transport system permease protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_331_curated_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12258..13481)
DNA (1224bp) protein (408aa)
ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003062FC4
ABC transporter permease {ECO:0000313|EMBL:AHY57612.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_331_curated_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13575..14879)
DNA (1305bp) protein (435aa)
ABC transporter permease n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HDW9_XANCT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC46048.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_331_curated_14
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14900..16117)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003621AD0
Uncharacterized protein {ECO:0000313|EMBL:AJC46046.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_331_curated_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16126..17457)
DNA (1332bp) protein (444aa)
ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ75_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHX12151.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_331_curated_16
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17467..18189)
DNA (723bp) protein (241aa)
ABC transporter family protein n=2 Tax=Xanthomonas campestris pv. citri RepID=H8FCS7_XANCI
phnL; ABC-transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:CCF67424.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
scnpilot_solids1_trim150_scaffold_331_curated_17
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18236..19504)
DNA (1269bp) protein (423aa)
Membrane fusion protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8G838_9XANT
membrane fusion protein; K02005 HlyD family secretion protein
Membrane fusion protein {ECO:0000313|EMBL:CAJ25486.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
scnpilot_solids1_trim150_scaffold_331_curated_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19722..21554
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003781697
scnpilot_solids1_trim150_scaffold_331_curated_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21618..22844)
DNA (1227bp) protein (409aa)
chromate transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00038210AD
putative chromate transport protein
Putative chromate transport protein {ECO:0000313|EMBL:AGU49110.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_331_curated_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23056..25356)
DNA (2301bp) protein (767aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E3F2BD
transcriptional regulator domain-containing protein
Transcriptional regulator domain protein {ECO:0000313|EMBL:ACF53022.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_331_curated_21
unknown

Not on your lists

25698..26072
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_331_curated_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26334..27254
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030510C7
Stenotrophomonas maltophilia strain ZBG7B contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81053.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_331_curated_23
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27314..29929
DNA (2616bp) protein (872aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE905F
Uncharacterized protein {ECO:0000313|EMBL:AKC88374.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_331_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30031..31539
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91711.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_331_curated_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31536..32162
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91710.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_331_curated_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32149..35580
DNA (3432bp) protein (1144aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91709.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_331_curated_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35676..36194)
DNA (519bp) protein (173aa)
putative lactoylglutathione lyase (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Putative lactoylglutathione lyase {ECO:0000313|EMBL:CAQ47487.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CAQ47487.1};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Lactoylglutathione lyase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G4Y6_STEMA
scnpilot_solids1_trim150_scaffold_331_curated_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36302..36811)
DNA (510bp) protein (170aa)
CopG n=2 Tax=Xanthomonadaceae RepID=F4ZBX7_XANCI
copG; hypothetical protein
Conserved hypothetical exported protein {ECO:0000313|EMBL:CAQ45929.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_331_curated_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36870..38135)
DNA (1266bp) protein (422aa)
Copper resistance protein B n=4 Tax=Xanthomonas campestris RepID=B0RVQ1_XANCB
Copper resistance protein CopB {ECO:0000313|EMBL:AKC86875.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
copB; copper resistance protein B precursor; K07233 copper resistance protein B
scnpilot_solids1_trim150_scaffold_331_curated_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38132..39904)
DNA (1773bp) protein (591aa)
Copper resistance protein A n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZIT7_9XANT
Stenotrophomonas maltophilia strain ZBG7B contig_129, whole genome shotgun sequence {ECO:0000313|EMBL:KIP79167.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
Copper resistance protein A
Displaying items 1-30 of 34 in total

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