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scnpilot_solids1_trim150_scaffold_1138_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1138_curated_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..96
DNA (96bp) protein (32aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003741CB7
Integrase {ECO:0000313|EMBL:AJC46516.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_1138_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1136..1474
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9T4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96225.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1138_curated_3
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1537..2682)
DNA (1146bp) protein (382aa)
integrase, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B39A65
Uncharacterized protein {ECO:0000313|EMBL:EWC53081.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_1138_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4121..4987
DNA (867bp) protein (289aa)
CitryL-CoA lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV37_9GAMM
CitryL-CoA lyase {ECO:0000313|EMBL:EIM03329.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aldolase/citrate lyase family protein
scnpilot_solids1_trim150_scaffold_1138_curated_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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5014..7440
DNA (2427bp) protein (809aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364E3A2
putative sodium/solute symporter
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1138_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7526..8407
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV39_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM03331.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1138_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8678..10870
DNA (2193bp) protein (731aa)
Putative TonB-dependent receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV40_9GAMM
Putative TonB-dependent receptor {ECO:0000313|EMBL:EIM03332.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_1138_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11173..12378
DNA (1206bp) protein (402aa)
Beta-lactamase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV41_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIM03333.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-lactamase
scnpilot_solids1_trim150_scaffold_1138_curated_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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12375..13316
DNA (942bp) protein (314aa)
Ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBA2_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1138_curated_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13346..15535
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV42_9GAMM
Sulfatase-modifying factor protein {ECO:0000313|EMBL:AHX15784.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1138_curated_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15532..17391
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CC429
Uncharacterized protein {ECO:0000313|EMBL:AHX15783.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1138_curated_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17505..18698
DNA (1194bp) protein (398aa)
formyl-CoA transferase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003662A92
putative acyl-CoA transferase
Putative acyl-CoA transferase {ECO:0000313|EMBL:AGU51094.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_1138_curated_13
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18712..18831
DNA (120bp) protein (40aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
transaldolase B; K00616 transaldolase [EC:2.2.1.2]
transaldolase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D75C5C
Displaying 13 items

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