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scnpilot_solids1_trim150_scaffold_69_curated_40

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(53841..55571)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 608.0
  • Bit_score: 949
  • Evalue 2.00e-273
Transcription termination factor Rho n=2 Tax=Stenotrophomonas maltophilia RepID=B4SLA6_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 589.0
  • Bit_score: 946
  • Evalue 1.60e-272
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 589.0
  • Bit_score: 946
  • Evalue 4.90e-273

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
TTGTCCGAGAACACTCCTTCCGAAACCGGGAGCGCCGACGCGCCCGTCGAGAAGCGCGTGCGCAAGCCGCGTGTCGCCAAGGCCGCCGAGGCCGCCGACAGCAGCAGCCCCGCTTCCGCCCCGGCCCAGTCCGCCCTGCCGCTGCCGGCCGGCGACGCTTCCCCCGCCCCGGCCGCTCCGGCCCCGGGCAACGAAGGCCAGGCGTCCGCGCCGGCCGGCAACCCGCACGGCGGCCAGGAAGGCGGCGAGCCGCGCGACGGCAACAACAACGCCCAGCGCCATGGCCAGCAGAACCCGCAGAATCAGCAGGGCCAGGGCCAGGGCCAGGGTCAGGGCAATCGCCGCGACCGCTTCCGCAACCGCCGCGAGCGCAACCGCGACCGCTTCCGCGACGACGGCCTGCCCGGCGACAACGGCAACGAGACCTTCGTGCCGCGCCCGCACCCGTCGGTGCCGGAGGGTTTCCCGGTCTATTCGCTGAGCGATCTGAAGAAGATGCCGGCGCACAAGCTGCTGGAGATCGCCGAGCAGCTGCAGATCACCGACGGCGTGGCCCGCGCCCGCAAGCAGGACGTGATCTTCGCCCTGCTCAAGGTGCTGACCCGCCATGGCGAGGGCGTGGCCGCCGACGGCGTGCTGGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCGCGGCCGAGGCCAGCTACCTGGCCGGCCCGGACGACACCTACATCTCGCCCAGCCAGATCCGCCGCTTCAACCTGCGCACCGGCGACCACATCGCCGGCCGCATCCGCTTCCCGAAGGACGGCGAGCGCTACTTCGCGCTGAACATCGTCGACACCATCAACGGTGAGCCGATCGAAGCGTCGAAGAACAAGGTGCTGTTCGAGAACCTGACCCCGCTGTTCCCGCGCAAGCGCTTCACCCTGGAACGCGGCAACGGCTCCTCGGAAGACATCACCGGCCGCATCCTCGACCTGATGGCGCCGCAGGGCAAGGGCCAGCGCGCGCTGATCGTCTCCCCGCCCAAGGCGGGCAAGACGATGATGATGCAGCAGATCGCCACGGCCATCACCACCAACCACCCGGAAGTGCACCTGATCGTGCTGCTGGTGGACGAGCGCCCGGAAGAAGTGACCGAGATGCAGCGCACCGTGCGCGGCGAAGTGGTCTCCTCGACCTTCGACGAGCCGGCCGCACGCCACGTGCAGGTGGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTGGACTCGATCACCCGCCTGGCGCGTGCCTACAACAATGTCGTGCCCAGCTCCGGCAAGGTACTGACCGGCGGCGTGGACGCCAATGCCCTGCACCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTCGAGGAAGGCGGCTCGCTGACCATCATCGCCACCGCGCTGGTCGAGACCGGCTCGAAGATGGACGAGGTGATCTACGAAGAGTTCAAGGGCACCGGCAACAGCGAAGTGCACCTGAACCGCCGCATCACCGAGAAGCGCGTGTACCCGGCCATCGACATCAACCGTTCCGGCACCCGCCGCGAAGACCTGCTGATCGAGCCGGAGCTGCTGCAGAAGATCTGGATCCTGCGCAAGCTGCTGCACCCGATGGACGAAATCGCCGCGATGGAATTCCTGCTCGACAAGATGAAGAACACCAAGTCCAACGACGAGTTCTTCGGTTCGATGAAGCGCTGA
PROTEIN sequence
Length: 577
LSENTPSETGSADAPVEKRVRKPRVAKAAEAADSSSPASAPAQSALPLPAGDASPAPAAPAPGNEGQASAPAGNPHGGQEGGEPRDGNNNAQRHGQQNPQNQQGQGQGQGQGNRRDRFRNRRERNRDRFRDDGLPGDNGNETFVPRPHPSVPEGFPVYSLSDLKKMPAHKLLEIAEQLQITDGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHIAGRIRFPKDGERYFALNIVDTINGEPIEASKNKVLFENLTPLFPRKRFTLERGNGSSEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQIATAITTNHPEVHLIVLLVDERPEEVTEMQRTVRGEVVSSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKNTKSNDEFFGSMKR*