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scnpilot_solids1_trim150_scaffold_69_curated_93

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 117573..118931

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030804FB similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 454.0
  • Bit_score: 754
  • Evalue 5.20e-215
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 455.0
  • Bit_score: 753
  • Evalue 1.60e-214
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 455.0
  • Bit_score: 749
  • Evalue 6.90e-214

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGGCCAACGAACGTCCTGCCCAGCAGTCCGATATCAAACAACTGATCAGCAAGGGCCTGGAACAGGGCTACCTGACCTACGCCGAAGTCAACGATCACCTGCCCGACGACATGGTCGATCCGGAGCAGATCGAAGACATCATCGGCCTGATCACCGGCATGGGCATCGATGTCCATGAAGTGGCGCCCGATGCCGACACGCTGATCCTGAGCGATGGCAACACCGGCAACCGCGAGGTGGATGATACCGCCGCCGAGGAAGCCGCTGCCGCACTTACCGCACTCGACACCGAAGGTGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTCGAGCTGCTGACCCGCGAAGGCGAAATCGCCATCGCCAAGCGCATCGAGGAAGGCCTGGGCCAGGTGCAGGCGGCGCTGGGCACCTTCCCGCCCGCGGTCGAGGCGGTGCTGGCCGACTACGAGCTGCACAAGGAAGGCAAGAAGCGCCTGGCCGAGATCATCGTCGGCTTCAACGACCTGGTCGAGGAAGAGCCGGCGCCGGCCGCCACCGACAGCGACGACGCGTCCGACGACGGCGATGCCGAGGCCGACGAGGACGAGGACGATGTCGGCGGCGACGAGGATACCGGCCCGACCGGTCCGGACCCGGTGGAAGTGGCCAACCGCATGGAGCAGCTGGCCAGCGACCTGGCCAAGTTCAAGAAGGCCCACGCCAAGGGCGACCTCAAGACGCAGGCCAAGCTGCGCGAGGAGCTGTCGGCGACCTTCGTGACCCTGAAGCTGCCGCTGCCGCTGACCGACGTGCTGGTGCGCCTGCTGCGCGACACCATGGGCCGGATCAAGGCCCAGGAACGCCGCGTGCTGCACCTGGCCACGGTCACCGCGCGCATGCCGCGCAAGGACTTCATCCGCTCCTGGGAAGGCAACCAGACCAACCTGGAATGGGTCGAGGACGCGATCAAGCGCAAGCAGAAGTGGTCCTCGGCACTGCGTGACGTCAAGGACCAGATCGTCGCCGAGCAGCAGGCCACGCTCGACGTGGAGAAGGAATCGCACCTGAGCCTGGACGAGCTGAAGGAAATCAGCCGGGTCATGGCCTATGGCGAAGCCAAGGCGCGCAAGGCCAAGAAGGAAATGGTCGAGGCCAACCTGCGCCTGGTGATCTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTCATCCAGGAGGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTATGCCACCTGGTGGATCCGCCAGGCGATCACCCGCTCGATCGCCGACCAGGCGCGCACCATC
PROTEIN sequence
Length: 453
MANERPAQQSDIKQLISKGLEQGYLTYAEVNDHLPDDMVDPEQIEDIIGLITGMGIDVHEVAPDADTLILSDGNTGNREVDDTAAEEAAAALTALDTEGGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLGQVQAALGTFPPAVEAVLADYELHKEGKKRLAEIIVGFNDLVEEEPAPAATDSDDASDDGDAEADEDEDDVGGDEDTGPTGPDPVEVANRMEQLASDLAKFKKAHAKGDLKTQAKLREELSATFVTLKLPLPLTDVLVRLLRDTMGRIKAQERRVLHLATVTARMPRKDFIRSWEGNQTNLEWVEDAIKRKQKWSSALRDVKDQIVAEQQATLDVEKESHLSLDELKEISRVMAYGEAKARKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI