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scnpilot_solids1_trim150_scaffold_66_curated_26

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(27788..29149)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 454.0
  • Bit_score: 452
  • Evalue 5.50e-124
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR37447.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 460.0
  • Bit_score: 456
  • Evalue 4.10e-125
wzt; polysaccharide ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 456.0
  • Bit_score: 439
  • Evalue 1.20e-120

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Taxonomy

Burkholderia grimmiae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCCTCTGAGATCGCACTGCGCGTCAACCATGTCAGCAAGGTATTCCGTGCGTACTCGAATCCGGCGAAGCGCCTCACCCACGCGCTCGGCATTCGCGCGAACACTGTCCTGAGGAAGGTCGGGCTGCCGCAGTTGGCGACCGACCACGACGCGATACAGGAGTTCGTCGCACTCGACGACATCAGCTTCGAAGTGATGCGGGGCCACACAACGGGCATTGTCGGACGCAATGGCGCCGGCAAGTCCACGCTGCTGCAGATCATCGCGGGCACGCTGGCCCCCAGCCAGGGCACGGTCGAGGTCAGCGGGAGGATCGCAGCGCTGCTGGAGCTCGGCTCCGGCTTCAACCCCGAGTTCAATGGCATCGAGAATGCCAGACTCAACGCCGCCATTCTCGGCCTCTCTCCGGAGGAAATCGACGCACGGATGGACTCCATCCTGGCATTCGCCGATATCGGCCACTTCGTGAACCGGCCGGTCAAGACCTATTCCTCCGGCATGATGGTTCGCCTCGCATTCGCCGTGCAGGCCCAGGTGGACCCGGAGATACTCATCGTCGATGAAGCCCTGGCCGTCGGCGATGCCAAGTTCCAGTCCAAGTGCTTTGCCCGGCTGGATGCATTGAAGGAAACGGGAACCTCCATCCTGTTCGTGTCCCACTCCACGGAACAGATCGTCAGTCACTGCGATGACGCCATCCTGATCGAGGGCGGGCAGCTGCGGCAGCGTGGCCAGCCGAAGGACGTGGTCCATACCTACCTGGACCTGCTGTTCGGCAAACCGCCGGCATCCACGCCCGCGGCGCGACAGGCGCCTCAATCCACGGAGCCTGTGCCTGCCGGCGCCCCCCCCGTGCTGGAAACGCGGGGCAACAGCTATGCCGACCAGCCCCACTACAACCCCTATGAGTTCCGATGGGGCGACGGTGCCGCGTGCATCGCCGACTTCAGACTGCTTGCCGATGGCGCCGAGGCGGCGCAGATCATCGCCGCGGGCACTTCGCTGCAGCTGGTGCTTGGAATATCGTTCGAACGCGCCATCAGTCGCCCGATCATGGGCCTGACGATCAAGTCGAAGGACGGCGTCACCGTCTTCGGGACAAACTCGGAACTGACCCGTTTCGCAGGCCTGCCCGCCTCGGTCGCGGAAGGCACGGAAATGCAGGTGGATATCCACTTCGAATGCAATCTTGGTCCCGGCGATTACTTCATATCGGTCGGCCTGGCCAGCCGCAAAGGCGAGGAGCTCGTCCCGCACGACCGGCGCTATGACTCCATACACTTCACCGTCACGGACGACGAGTGCTTCGGCTTCACCAAGCTACCGATGACTTTCAGCATCAAGGAACTACGGTCTTGA
PROTEIN sequence
Length: 454
MSSEIALRVNHVSKVFRAYSNPAKRLTHALGIRANTVLRKVGLPQLATDHDAIQEFVALDDISFEVMRGHTTGIVGRNGAGKSTLLQIIAGTLAPSQGTVEVSGRIAALLELGSGFNPEFNGIENARLNAAILGLSPEEIDARMDSILAFADIGHFVNRPVKTYSSGMMVRLAFAVQAQVDPEILIVDEALAVGDAKFQSKCFARLDALKETGTSILFVSHSTEQIVSHCDDAILIEGGQLRQRGQPKDVVHTYLDLLFGKPPASTPAARQAPQSTEPVPAGAPPVLETRGNSYADQPHYNPYEFRWGDGAACIADFRLLADGAEAAQIIAAGTSLQLVLGISFERAISRPIMGLTIKSKDGVTVFGTNSELTRFAGLPASVAEGTEMQVDIHFECNLGPGDYFISVGLASRKGEELVPHDRRYDSIHFTVTDDECFGFTKLPMTFSIKELRS*