name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_66_curated_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1105)
|
Strain LMCP11 contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27195.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KIQ27195.1};; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
beta-ketoacyl-[ACP] synthase I; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
3-oxoacyl-ACP synthase n=1 Tax=Pseudomonas geniculata RepID=UPI00029AEFCC
|
|
scnpilot_solids1_trim150_scaffold_66_curated_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1105..1620)
|
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacte
3-hydroxydecanoyl-(acyl carrier protein) dehydratase (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003157859
|
|
scnpilot_solids1_trim150_scaffold_66_curated_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1781..2896
|
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
DNA polymerase IV n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D9DCFE
|
|
scnpilot_solids1_trim150_scaffold_66_curated_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2949..3596
|
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
phosphoglycolate phosphatase n=1 Tax=Xanthomonas sacchari RepID=UPI0002630230
|
|
scnpilot_solids1_trim150_scaffold_66_curated_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3759..5615)
|
Vitamin B12 transporter btuB n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SX24_XANCT
TonB-dependent outer membrane receptor protein {ECO:0000313|EMBL:ELP95868.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
TonB-dependent outer membrane receptor protein; K02014 iron complex outermembrane recepter protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6100..7170
|
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUC0_9BRAD
|
|
scnpilot_solids1_trim150_scaffold_66_curated_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7167..7751
|
putative phosphoglycerate mutase family; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003817CD5
Stenotrophomonas maltophilia strain ZBG7B contig_81, whole genome shotgun sequence {ECO:0000313|EMBL:KIP81337.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7748..8491
|
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC74_9RHIZ
|
|
scnpilot_solids1_trim150_scaffold_66_curated_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8509..8883)
|
Regulatory protein, TfoX family n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7FQG5_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39425.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
TfoX domain-containing protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8880..9362)
|
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DAEEEE
Diguanylate cyclase {ECO:0000313|EMBL:AHY60433.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07170 GAF domain-containing protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_11
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9570..9938)
|
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6784F
Phasin-family protein {ECO:0000313|EMBL:EKU25349.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_12
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10030..10386)
|
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003765C53
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:GAE55611.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10497..11906)
|
ATP-dependent RNA helicase {ECO:0000313|EMBL:CCP09593.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCP09593.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
ATP-dependent RNA helicase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIN4_STEMA
|
|
scnpilot_solids1_trim150_scaffold_66_curated_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12387..13376
|
fumarylacetoacetate hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003117E5B
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACF50186.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_15
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13523..14179
|
Probable maleylacetoacetate isomerase protein {ECO:0000313|EMBL:CBA17195.1}; EC=5.2.1.2 {ECO:0000313|EMBL:CBA17195.1};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
maleylacetoacetate isomerase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036CCE82
|
|
scnpilot_solids1_trim150_scaffold_66_curated_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14258..15391)
|
twitching motility protein PilT n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E39A4B
Twitching motility protein PilT {ECO:0000313|EMBL:AHY60417.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
twitching motility protein; K02670 twitching motility protein PilU
|
|
scnpilot_solids1_trim150_scaffold_66_curated_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15485..15871
|
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00002DD088
Outer membran protein {ECO:0000313|EMBL:CCP14571.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
putative outer membrane protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15871..16758
|
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F18934
Membrane protein {ECO:0000313|EMBL:AHY60415.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
OmpA/MotB domain-containing protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17152..17370
|
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UFN0_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC46016.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_20
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17557..18927
|
cbsB; putative cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cystathionine beta-synthase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DZM5_STEMA
Cystathionine beta-synthase {ECO:0000313|EMBL:EZP45332.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18998..20185
|
CYS1; putative cystathionine beta/gamma-lyase; K01758 cystathionine gamma-lyase [EC:4.4.1.1]
Putative cystathionine beta/gamma-lyase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FLU7_STRMK
Putative cystathionine beta/gamma-lyase {ECO:0000313|EMBL:CAQ44201.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_22
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20178..21089
|
rmd; NDP-hexose oxidoreductase (EC:5.1.3.2)
NAD-dependent dehydratase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A781
NAD-dependent dehydratase {ECO:0000313|EMBL:KGR62302.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_23
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21086..22072
|
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Xanthomonas vasicola RepID=UPI0001CC005C
|
|
scnpilot_solids1_trim150_scaffold_66_curated_24
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22280..23443)
|
Glycosyl transferase family 1 n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D7C7_9PSED
group 1 glycosyl transferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
scnpilot_solids1_trim150_scaffold_66_curated_25
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23448..27791)
|
glycosyl transferase family 2 n=1 Tax=Pseudomonas amygdali RepID=UPI0002FAF178
methyltransferase, FkbM family
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
scnpilot_solids1_trim150_scaffold_66_curated_26
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27788..29149)
|
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR37447.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
wzt; polysaccharide ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein
|
|
scnpilot_solids1_trim150_scaffold_66_curated_27
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29139..29975)
|
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N4M4_PSEU6
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_28
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30092..30970
|
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003658AE9
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADH90717.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
scnpilot_solids1_trim150_scaffold_66_curated_29
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31031..31921
|
Uncharacterized protein n=2 Tax=Xanthomonas RepID=Q8PGL9_XANAC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
|
|
scnpilot_solids1_trim150_scaffold_66_curated_30
unknown
|
Not on your lists |
31923..32486
|
This feature has no annotations |