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scnpilot_solids1_trim150_scaffold_66_curated

Search features with annotation key words

Displaying items 61-90 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_66_curated_61
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65111..65887)
DNA (777bp) protein (259aa)
salt-induced outer membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EDE1E7
Membrane protein {ECO:0000313|EMBL:AHY57584.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Putative salt-induced outer membrane protein; K07283 putative salt-induced outer membrane protein
scnpilot_solids1_trim150_scaffold_66_curated_62
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66049..67014
DNA (966bp) protein (322aa)
transcriptional regulator n=1 Tax=Xanthomonas RepID=UPI000262A7EA
Transcriptional regulator {ECO:0000313|EMBL:AJC47095.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_63
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67114..68580
DNA (1467bp) protein (489aa)
UbiD family decarboxylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT23_9GAMM
ubiD_[H]; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_66_curated_64
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68581..69066)
DNA (486bp) protein (162aa)
DnrO protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY2_9GAMM
DnrO protein {ECO:0000313|EMBL:EIM02924.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_65
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69239..70237
DNA (999bp) protein (333aa)
Putative protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT33_9GAMM
Protease {ECO:0000313|EMBL:KGM53563.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
yhbU; peptidase (Collagenase-like)
scnpilot_solids1_trim150_scaffold_66_curated_66
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70248..71120
DNA (873bp) protein (291aa)
Putative protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P0_9GAMM
Protease {ECO:0000313|EMBL:KGM53562.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_67
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71337..72755)
DNA (1419bp) protein (473aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
L-aspartate oxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VT37_9GAMM
aspartate oxidase
scnpilot_solids1_trim150_scaffold_66_curated_68
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72752..73780)
DNA (1029bp) protein (343aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL1_9GAMM
scnpilot_solids1_trim150_scaffold_66_curated_69
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73848..74699)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM51208.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_70
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74692..75180)
DNA (489bp) protein (163aa)
DGC domain containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAL0_9GAMM
Zinc-binding protein {ECO:0000313|EMBL:KGM53558.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_71
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75280..75915)
DNA (636bp) protein (212aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030D9BA0
Blc1 protein {ECO:0000313|EMBL:CCP13280.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
lipocalin family protein; K03098 outer membrane lipoprotein Blc
scnpilot_solids1_trim150_scaffold_66_curated_72
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76011..76319
DNA (309bp) protein (103aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B68811
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ94894.1}; TaxID=383407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola (strain BLS256).;"
scnpilot_solids1_trim150_scaffold_66_curated_73
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76388..78487
DNA (2100bp) protein (700aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26]
Prolyl oligopeptidase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KK07_STEMA
Prolyl oligopeptidase {ECO:0000313|EMBL:EQM78493.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
scnpilot_solids1_trim150_scaffold_66_curated_74
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78582..79784)
DNA (1203bp) protein (401aa)
Putative aminotransferase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FHW0_STRMK
hypothetical protein
Putative aminotransferase {ECO:0000313|EMBL:CAQ47474.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_66_curated_75
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79884..81992
DNA (2109bp) protein (703aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83]
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003608DBA
Peptidase {ECO:0000313|EMBL:AHY57643.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_66_curated_76
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82022..82411
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJN6_STRM5
hypothetical protein; K09790 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53177.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_66_curated_77
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82466..82666
DNA (201bp) protein (67aa)
sugar transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFB009
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH14179.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_66_curated_78
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82674..83510
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
diaminopimelate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F9A9B
scnpilot_solids1_trim150_scaffold_66_curated_79
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83507..84184
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FFFF4D
hypothetical protein; K09921 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47719.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_solids1_trim150_scaffold_66_curated_80
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84198..85088
DNA (891bp) protein (297aa)
tyrosine recombinase XerC n=1 Tax=Xanthomonas sacchari RepID=UPI000262B398
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
scnpilot_solids1_trim150_scaffold_66_curated_81
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85192..85689
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BJS6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHM96827.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_82
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85677..86150)
DNA (474bp) protein (158aa)
Putative membrane protein n=2 Tax=Bordetella parapertussis RepID=K0MIK9_BORPB
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV60845.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein; K09943 hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_83
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86268..86819
DNA (552bp) protein (184aa)
20S proteasome subunits A and B; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
ATP-dependent protease subunit HslV n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPE7_PSEUU
scnpilot_solids1_trim150_scaffold_66_curated_84
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86946..88322
DNA (1377bp) protein (459aa)
ATP-dependent protease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F53EF9
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hslU; ATP-dependent hsl protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
scnpilot_solids1_trim150_scaffold_66_curated_85
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88387..89085)
DNA (699bp) protein (233aa)
TetR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6A68D
TetR family transcriptional regulator {ECO:0000313|EMBL:AHY57652.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor
scnpilot_solids1_trim150_scaffold_66_curated_86
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89126..90445
DNA (1320bp) protein (440aa)
hemolysin D n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9090
Acra3 protein {ECO:0000313|EMBL:CCP13262.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
scnpilot_solids1_trim150_scaffold_66_curated_87
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90458..93604
DNA (3147bp) protein (1049aa)
multidrug transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFF4FC
Multidrug transporter {ECO:0000313|EMBL:AHY57654.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids1_trim150_scaffold_66_curated_88
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93699..93950)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D86288
Uncharacterized protein {ECO:0000313|EMBL:EQM78509.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_89
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94080..94532)
DNA (453bp) protein (151aa)
cytosine deaminase; K01485 cytosine deaminase [EC:3.5.4.1]
Cytosine deaminase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HEG2_XANCT
Cytosine deaminase {ECO:0000313|EMBL:ELQ16419.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
scnpilot_solids1_trim150_scaffold_66_curated_90
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94625..95389
DNA (765bp) protein (255aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Xanthomonas arboricola RepID=UPI000316289F
Displaying items 61-90 of 115 in total

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