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scnpilot_solids1_trim150_scaffold_66_curated

Search features with annotation key words

Displaying items 31-60 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_66_curated_31
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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32569..34332
DNA (1764bp) protein (588aa)
Uncharacterized protein n=2 Tax=Pseudomonas amygdali RepID=F3JVF6_PSESZ
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids1_trim150_scaffold_66_curated_32
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34397..35434
DNA (1038bp) protein (346aa)
Family 2 glycosyl transferase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQJ4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KFN49399.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
group 2 family glycosyltransferase
scnpilot_solids1_trim150_scaffold_66_curated_33
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(35755..36690)
DNA (936bp) protein (312aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJC5_STEMA
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CCP09624.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
etfA; putative electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
scnpilot_solids1_trim150_scaffold_66_curated_34
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(36772..37518)
DNA (747bp) protein (249aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L139_9GAMM
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:EED40505.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit
scnpilot_solids1_trim150_scaffold_66_curated_35
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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37819..38874
DNA (1056bp) protein (352aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KUZ9_STEMA
scnpilot_solids1_trim150_scaffold_66_curated_36
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38888..39775
DNA (888bp) protein (296aa)
rmlA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCH11132.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CCH11132.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJ93_STEMA
scnpilot_solids1_trim150_scaffold_66_curated_37
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39772..40329
DNA (558bp) protein (186aa)
rmlC; putative DTDP-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B3000
Stenotrophomonas maltophilia strain ZBG7B contig_37, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86135.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_66_curated_38
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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40326..41243
DNA (918bp) protein (306aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EZP45311.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EZP45311.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
rfbD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FMQ0_STRMK
scnpilot_solids1_trim150_scaffold_66_curated_39
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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41446..43182
DNA (1737bp) protein (579aa)
Putative type II secretion protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X177_PSEDE
Uncharacterized protein {ECO:0000313|EMBL:KFN52002.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
putative type II secretion protein
scnpilot_solids1_trim150_scaffold_66_curated_40
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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43175..44383
DNA (1209bp) protein (403aa)
Type II secretion system protein n=1 Tax=Beggiatoa sp. PS RepID=A7BY32_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN52003.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
type II secretion system protein; K02455 general secretion pathway protein F
scnpilot_solids1_trim150_scaffold_66_curated_41
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44403..44840
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN52004.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
General secretion pathway protein G id=2525111 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
general secretion pathway protein G
scnpilot_solids1_trim150_scaffold_66_curated_42
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44809..45240
DNA (432bp) protein (144aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Aeromonas veronii AER39 RepID=K1IYU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN52005.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
prepilin-type cleavage/methylation protein; K02456 general secretion pathway protein G
scnpilot_solids1_trim150_scaffold_66_curated_43
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45230..45649
DNA (420bp) protein (140aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CJB4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37068.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hplV; type II secretion system protein; K02458 general secretion pathway protein I
scnpilot_solids1_trim150_scaffold_66_curated_44
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45646..46323
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN52007.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
scnpilot_solids1_trim150_scaffold_66_curated_45
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46313..47353
DNA (1041bp) protein (347aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN52008.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Type II secretory pathway, component PulK id=2525107 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_46
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47304..48368
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CIQ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37065.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_66_curated_47
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48365..48991
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HS52_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:KFL37064.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
scnpilot_solids1_trim150_scaffold_66_curated_48
unknown

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48988..49524
DNA (537bp) protein (179aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_66_curated_49
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49524..51851
DNA (2328bp) protein (776aa)
Type II secretory pathway, component PulD n=1 Tax=Beggiatoa alba B18LD RepID=I3CEA7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN49701.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
gspD; general secretion pathway protein D; K02453 general secretion pathway protein D
scnpilot_solids1_trim150_scaffold_66_curated_50
unknown

Not on your lists

52292..53767
DNA (1476bp) protein (492aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_66_curated_51
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53972..55060
DNA (1089bp) protein (363aa)
acyltransferase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248458F
Uncharacterized protein {ECO:0000313|EMBL:KFN49391.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
acyltransferase family protein
scnpilot_solids1_trim150_scaffold_66_curated_52
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55194..56597)
DNA (1404bp) protein (468aa)
manA; putative xanthan biosynthesis protein; K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
Xanthan biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQL6_STEMA
Xanthan biosynthesis protein {ECO:0000313|EMBL:EMI51477.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
scnpilot_solids1_trim150_scaffold_66_curated_53
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56607..57953)
DNA (1347bp) protein (449aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphomannomutase {ECO:0000313|EMBL:ACF50214.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ACF50214.1};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Phosphomannomutase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SJ46_STRM5
scnpilot_solids1_trim150_scaffold_66_curated_54
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58100..58834
DNA (735bp) protein (245aa)
lpsI; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A {ECO:0000313|EMBL:CCH11137.1}; EC=2.8.3.5 {ECO:0000313|EMBL:CCH11137.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJ98_STEMA
scnpilot_solids1_trim150_scaffold_66_curated_55
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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58836..59462
DNA (627bp) protein (209aa)
lpsJ; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V6I1_STEMA
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:AHY60391.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_66_curated_56
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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59676..59981
DNA (306bp) protein (102aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003607A8F
Membrane protein {ECO:0000313|EMBL:AJC46155.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
inner membrane protein
scnpilot_solids1_trim150_scaffold_66_curated_57
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60276..62186
DNA (1911bp) protein (637aa)
Glucans biosynthesis glucosyltransferase H {ECO:0000256|HAMAP-Rule:MF_01072, ECO:0000256|SAAS:SAAS00010833}; EC=2.4.1.- {ECO:0000256|HAMAP-Rule:MF_01072, ECO:0000256|SAAS:SAAS00010802};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
opgH; glucosyltransferase (EC:2.4.1.-); K03669 membrane glycosyltransferase [EC:2.4.1.-]
glucosyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037928BA
scnpilot_solids1_trim150_scaffold_66_curated_58
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62610..63275
DNA (666bp) protein (222aa)
carboxylesterase (EC:3.1.1.1); K06999 phospholipase/carboxylesterase
Carboxylesterase {ECO:0000313|EMBL:AEM52888.1}; EC=3.1.1.1 {ECO:0000313|EMBL:AEM52888.1};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Carboxylesterase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4A6_STEMA
scnpilot_solids1_trim150_scaffold_66_curated_59
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63370..64095
DNA (726bp) protein (242aa)
transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262A7E6
Chemotaxis protein CheY {ECO:0000313|EMBL:AJC47092.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
LytTR family two component transcriptional regulator; K08083 two-component system, LytT family, response regulator AlgR
scnpilot_solids1_trim150_scaffold_66_curated_60
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64118..65026
DNA (909bp) protein (303aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
porphobilinogen deaminase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031F97E4
Displaying items 31-60 of 115 in total

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