ggKbase home page

scnpilot_solids1_trim150_scaffold_2282_curated_9

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(8582..10825)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 747.0
  • Bit_score: 1309
  • Evalue 0.0
parC; DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-] similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 747.0
  • Bit_score: 1307
  • Evalue 0.0
DNA topoisomerase IV subunit A n=1 Tax=Pseudomonas geniculata RepID=UPI00029A5906 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 747.0
  • Bit_score: 1310
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
ATGACCGAACTCGTACGCCCCGCCTTCCACGGCTTCGAGCAGCAGCCGCTGCGCGAGTACGCCGAGCGCGCCTATCTCGACTACTCCATGTACGTGGTACTGGACCGCGCCCTGCCCTTCATCGGCGACGGGCTCAAGCCGGTGCAGCGCCGCATCATCTATTCGATGAGCGAGCTGGGCCTGAACGCCGCGTCCAAGCCGAAGAAGTCCGCGCGCACCGTCGGCGACGTGATCGGCAAGTACCACCCGCACGGCGACAGCGCCTGCTACGAGGCGCTGGTGCTGATGGCCCAGCCGTTCTCCTACCGCTACCCGCTGATCGACGGCCAGGGCAACTTCGGCTCCAGCGACGACCCCAAGTCGTTCGCGGCCATGCGCTATACCGAATCCAAGCTGACCCCGATCGCCGAAGTGCTGCTGGGCGAACTGGGCCAGGGCACCACCGACTGGTCGCCCAACTTCGACGGCACGCTGGAGGAGCCGAGCTGGCTGCCGGCGCGGCTGCCGCACCTGCTGCTCAACGGCACCACCGGCATCGCCGTGGGCATGGCCACCGACGTGCCGCCGCACAACCTGAACGAGATCGTCAGCGCGCTGGTGCGGCTGATCGACGACCCGGACGCCAGCGTCGCCGACCTGTGCGAGCACGTGAAGGGCCCGGACTACCCGACCACCGCCGAGATCATCACCCCGGCCAGCGACCTGCGCCAGCTCTACGAGACCGGCAACGGCAGCGTGCGCGCCCGCGCCACCTTCCAGAAAGAAAACAGCAACATCGTCATCACCGCGCTGCCGCACCAGGTATCGCCGTCCAAGGTGATCGAACAGATCGCCCAGCAGATGCGCGCCAAGAAGCTGCCCTGGCTGGAGGACATCCGCGACGAATCCGACCACGCCAACCCGGTGCGCGTGGTGCTGATCCCGCGCTCCAGCCGCGTCGACGCCGAGCAGCTGATGGGCCACCTGTTCGCCACCACCGACCTGGAGAAGAGCTACCGGGTCAACCTCAACGTCATCGGCCTGGACGGCCGCCCGCAGGTCAAGAACCTGCGGCAGCTGCTGGGCGAGTGGCTGCGCTTCCGCCAGGACACCGTCACCCGCCGCCTCAACCACCGGCTGCAGAAGGTCGAGCGCCGCCTGCACCTGTTGGAAGGCCTGCTGGTGGCCTTCCTCAACCTGGACGAGGTGATCCGCATCATCCGCACCGAGGATGAGCCGAAGCCGGCGCTGATCGCCCGCTTCGGCCTGTCCGAGGACCAGGCCGAGTACATCCTGGAGACCAAGCTCAAGCAGCTGGCGCGCCTGGAGGAAATGAAGATCCGCGGCGAGCAGGACGAACTGGCCGCCGAGCGCGAGAAGATCCTGTCCATCCTCGGCAGCGCCGCCAGGCTCAGGAAACTGGTCAAGGACGAACTGCTGGCCGACGCAAAGAAGTTCGGCGACGCGCGCCGTTCGCCGCTGGTGCAGCGCGATGCCGCCCAGGCCATCGACGAGACCGAACTGGTGGCCAGCGAACCGGTCACCGTGGTGCTGTCGGAAAAGGGCTGGGTGCGCGCGGCCAAGGGCCATGACGTGGACGCCGCCGGCCTGTCCTACCGCGAAGGCGACAGCCTGCTGGCGGCGGTGCGCGGGCGCAGCACCCAGCAGGTGGCGTTCCTCGACAGCGAGGGCCGCGCCTACTCCACGCCGGCGCATACCCTGCCCTCGGCACGCGGCAACGGCGAGCCGCTGACCGGCCGCTTCTCGCCGGCCGCCGGCAGCAGTTTCGTCACCCTGGCCAGCGGCGACAACGACACCCGTTTCGTGCTCGCCTCCTCGCACGGCTATGGCTTCGTCACCCGCTTCGAGAACCTCACCGGCCGCAACAAGGCCGGCAAGGCCATGCTCAACCTGTCCCCCGGTGCGGCGGTGCTGCAGCCGATGGTGGTGGCCAACCCGCAGGCCGATCGCATCGTCGCGGTCACCAGCGCCGGCAACATGCTTGCCATCCCGGCCACCGAACTGCCCGAGCTGGACAAGGGCAAGGGCAACAAGATCATCGAGATCCCCAAGGCCAAGCTCGCCACCGAACGCGTGGTCGCGGTGGTCGCGGTATCGCCGGGCGCCACCCTGCAGGTCCGCAGCGGCCAGCGCACCATGAACCTGTCGTTCAAGGAACTGGATGCGTACGTGGGTGCGCGGGCCTCGCGAGGACACTTGTTGCCGAGGGGGTGGCAGAAGGTCGAGGGGCTCGACGTCCAGTAA
PROTEIN sequence
Length: 748
MTELVRPAFHGFEQQPLREYAERAYLDYSMYVVLDRALPFIGDGLKPVQRRIIYSMSELGLNAASKPKKSARTVGDVIGKYHPHGDSACYEALVLMAQPFSYRYPLIDGQGNFGSSDDPKSFAAMRYTESKLTPIAEVLLGELGQGTTDWSPNFDGTLEEPSWLPARLPHLLLNGTTGIAVGMATDVPPHNLNEIVSALVRLIDDPDASVADLCEHVKGPDYPTTAEIITPASDLRQLYETGNGSVRARATFQKENSNIVITALPHQVSPSKVIEQIAQQMRAKKLPWLEDIRDESDHANPVRVVLIPRSSRVDAEQLMGHLFATTDLEKSYRVNLNVIGLDGRPQVKNLRQLLGEWLRFRQDTVTRRLNHRLQKVERRLHLLEGLLVAFLNLDEVIRIIRTEDEPKPALIARFGLSEDQAEYILETKLKQLARLEEMKIRGEQDELAAEREKILSILGSAARLRKLVKDELLADAKKFGDARRSPLVQRDAAQAIDETELVASEPVTVVLSEKGWVRAAKGHDVDAAGLSYREGDSLLAAVRGRSTQQVAFLDSEGRAYSTPAHTLPSARGNGEPLTGRFSPAAGSSFVTLASGDNDTRFVLASSHGYGFVTRFENLTGRNKAGKAMLNLSPGAAVLQPMVVANPQADRIVAVTSAGNMLAIPATELPELDKGKGNKIIEIPKAKLATERVVAVVAVSPGATLQVRSGQRTMNLSFKELDAYVGARASRGHLLPRGWQKVEGLDVQ*