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scnpilot_solids1_trim150_scaffold_2282_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2282_curated_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..207
DNA (207bp) protein (69aa)
ArsC family protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=K8ZE86_XANCT
Arsenate reductase {ECO:0000313|EMBL:KHL53055.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2282_curated_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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212..1348
DNA (1137bp) protein (379aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotropho
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SWA0_STEMA
scnpilot_solids1_trim150_scaffold_2282_curated_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1689..3374
DNA (1686bp) protein (562aa)
asnB; asparagine synthetase B; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UPY5_PSEUP
Asparagine synthetase B {ECO:0000313|EMBL:AKC87513.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_2282_curated_4
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3527..3952
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4N0S0_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ75317.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC402.;"
endoribonuclease L-PSP
scnpilot_solids1_trim150_scaffold_2282_curated_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3990..6416)
DNA (2427bp) protein (809aa)
penicillin acylase II; K01434 penicillin amidase [EC:3.5.1.11]
Penicillin acylase II n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4USS9_XANC8
Penicillin acylase {ECO:0000313|EMBL:AHY59670.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_2282_curated_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6560..7048
DNA (489bp) protein (163aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
bacterioferritin n=1 Tax=Xanthomonadaceae RepID=UPI000299FFF1
bacterioferritin; K03594 bacterioferritin
scnpilot_solids1_trim150_scaffold_2282_curated_7
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7119..7778)
DNA (660bp) protein (220aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
thiopurine S-methyltransferase; K00569 thiopurine S-methyltransferase [EC:2.1.1.67]
Thiopurine S-methyltransferase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CKM7_XANCA
scnpilot_solids1_trim150_scaffold_2282_curated_8

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comp(7789..8040)
DNA (252bp) protein (84aa)
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BIX2_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP48730.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_2282_curated_9
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8582..10825)
DNA (2244bp) protein (748aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
parC; DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase IV subunit A n=1 Tax=Pseudomonas geniculata RepID=UPI00029A5906
scnpilot_solids1_trim150_scaffold_2282_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11033..11476
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQ43_STRM5
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCH11921.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_2282_curated_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11473..12975
DNA (1503bp) protein (501aa)
Putative outer membrane multidrug efflux protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FIC8_STRMK
putative outer membrane multidrug efflux protein
Putative outer membrane multidrug efflux protein {ECO:0000313|EMBL:CAQ45062.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_2282_curated_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12986..14164
DNA (1179bp) protein (393aa)
Secretion protein HlyD family protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQ45_STRM5
secretion protein HlyD family protein; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:AEM50611.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_2282_curated_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14176..15591
DNA (1416bp) protein (472aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQ46_STRM5
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ACF50994.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
Displaying 13 items

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