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scnpilot_solids1_trim150_scaffold_393_curated_2

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(15403..16131)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C biogenesis protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002895816 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 241.0
  • Bit_score: 359
  • Evalue 2.00e-96
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EGD57489.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 242.0
  • Bit_score: 243
  • Evalue 3.80e-61
cytochrome c biogenesis transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 235.0
  • Bit_score: 230
  • Evalue 5.80e-58

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAGCCTGGGTTTGAATCCGGCACTGGCCTACGTGGCCGGTGCCTTGACCATCCTTTCCCCCTGCGTGTTGCCGCTGGTGCCGATCGTGCTGTCGTCAGCGGCGCAGCGGCACCGCCTGGCACCGCTGGCGCTGTCGGCCGGCCTGGTGCTGGCGTTCACCGGCACCGGCTTCGTGGTGGCGGTCTTCGGGCAGTCGCTGGGCATCGACACCCTGGCCGTACGCGCCGCGGGCGCGGTGATCCTGTGCCTGGCCGGACTGGTGTTGCTGCTGCCGCCGTTGCAGCGCCTGCTGACCCGCGCCGCCACGCCGTTGGCGAACTGGGCGGGCCGAACCCAGCTTGCATTCGATGCGCGGGGAGGGCTGTGGGGCCAGGCCCTGGTCGGGATGCTGCTGGGCGTGGTGTGGGCTCCCTGCGTCGGCCCGACGCTGGGGGCGGCCATCGCGCTGGCGGCGGCAGGCCAGAGCCTGGGCGCGGCCTCGCTGGTGATGGCGGCGTTCGGCCTGGGCATCGCCAGCGTGCTGCTGGTCATCGCCTTCGCCGCACGCGGCGCCCTGGACCGCTGGCGTGGCCGGCTGATGGGCGCCGGCAGTCGCGGCAAACAGCTGCTGGGCATCCTCCTGCTGCTGGTCGGCGGCCTGATCCTCAGCGGCTGGGACCGCCGGATCGAGGCCTTCGCCCTGGACCACCTGCCGGACTGGATGACGCGCCTGTCCACCGCATTCTGA
PROTEIN sequence
Length: 243
MSLGLNPALAYVAGALTILSPCVLPLVPIVLSSAAQRHRLAPLALSAGLVLAFTGTGFVVAVFGQSLGIDTLAVRAAGAVILCLAGLVLLLPPLQRLLTRAATPLANWAGRTQLAFDARGGLWGQALVGMLLGVVWAPCVGPTLGAAIALAAAGQSLGAASLVMAAFGLGIASVLLVIAFAARGALDRWRGRLMGAGSRGKQLLGILLLLVGGLILSGWDRRIEAFALDHLPDWMTRLSTAF*