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scnpilot_solids1_trim150_scaffold_393_curated

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_393_curated_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81..14765)
DNA (14685bp) protein (4895aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NBA3_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EYR70413.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
membrane protein of unknown function
scnpilot_solids1_trim150_scaffold_393_curated_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15403..16131)
DNA (729bp) protein (243aa)
cytochrome C biogenesis protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002895816
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EGD57489.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
cytochrome c biogenesis transmembrane protein
scnpilot_solids1_trim150_scaffold_393_curated_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16144..16599)
DNA (456bp) protein (152aa)
thioredoxin domain-containing protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288123A
putative thioredoxin
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_solids1_trim150_scaffold_393_curated_4
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16830..17471)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HIY4_PSEAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQM70765.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
scnpilot_solids1_trim150_scaffold_393_curated_5
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17468..18058)
DNA (591bp) protein (197aa)
RNA polymerase sigma-E factor protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CPN5_9BURK
RNA polymerase sigma factor {ECO:0000313|EMBL:EOA02068.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
rpoE; RNA polymerase sigma-E factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_393_curated_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18727..20010
DNA (1284bp) protein (428aa)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23587.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AJG23587.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=4 Tax=Ralstonia RepID=B2U9L7_RALPJ
scnpilot_solids1_trim150_scaffold_393_curated_7
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20422..21477)
DNA (1056bp) protein (352aa)
zinc-binding dehydrogenase n=1 Tax=Erwinia carotovora RepID=UPI0001A435D3
alcohol dehydrogenase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_393_curated_8
unknown

Not on your lists

comp(21727..21978)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_393_curated_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22332..22679
DNA (348bp) protein (116aa)
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KAP4_STEMA
Membrane protein {ECO:0000313|EMBL:EQM72616.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
putative phospholipid membrane-attached protein; K04065 hyperosmotically inducible periplasmic protein
scnpilot_solids1_trim150_scaffold_393_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22957..23988)
DNA (1032bp) protein (344aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A8F079
Putative DNA ligase family protein {ECO:0000313|EMBL:EIL99286.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_393_curated_11
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24260..24634)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KGR60442.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;"
scnpilot_solids1_trim150_scaffold_393_curated_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25473..25841)
DNA (369bp) protein (123aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EE0FAC
Transcriptional regulator {ECO:0000313|EMBL:EQM75136.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
response regulator receiver
scnpilot_solids1_trim150_scaffold_393_curated_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26183..28540)
DNA (2358bp) protein (786aa)
Tex-like protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K4V4_STEMA
Tex-like protein {ECO:0000313|EMBL:AEM51790.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Tex-like protein; K06959 uncharacterized protein
scnpilot_solids1_trim150_scaffold_393_curated_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28675..28890)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas RepID=G0K4V5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45417.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29021..29506)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6ED62
Uncharacterized protein {ECO:0000313|EMBL:AHY58713.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29515..29883)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036686B5
Uncharacterized protein {ECO:0000313|EMBL:AHY58711.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_17
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29880..30944)
DNA (1065bp) protein (355aa)
poly (3-hydroxybutyric acid) synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly (3-hydroxybutyric acid) synthase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HC87_XANCT
Poly (3-hydroxybutyric acid) synthase {ECO:0000313|EMBL:ELQ15680.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
scnpilot_solids1_trim150_scaffold_393_curated_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30941..32002)
DNA (1062bp) protein (354aa)
pha synthase subunit protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4EC
PHA synthase subunit {ECO:0000313|EMBL:AHY58709.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
poly(hydroxyalcanoate) granule associated protein
scnpilot_solids1_trim150_scaffold_393_curated_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32064..32678)
DNA (615bp) protein (205aa)
pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6BFA4
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AHY58708.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_393_curated_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32843..33490
DNA (648bp) protein (216aa)
methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380F415
Methyltransferase type 11 {ECO:0000313|EMBL:EED37912.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
type 11 methyltransferase
scnpilot_solids1_trim150_scaffold_393_curated_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33494..33982)
DNA (489bp) protein (163aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000378C570
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:AHY58706.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Nudix hydrolase family protein
scnpilot_solids1_trim150_scaffold_393_curated_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34095..34592)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D734E5
Uncharacterized protein {ECO:0000313|EMBL:AHY58705.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09920 hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_23
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34624..35445)
DNA (822bp) protein (274aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1261556 species="Bacteri
PEP synthetase regulatory protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D0C93
hypothetical protein; K09773 hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_24
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35640..38018
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
pps; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2]
Phosphoenolpyruvate synthase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KHW9_STEMA
scnpilot_solids1_trim150_scaffold_393_curated_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38204..39028)
DNA (825bp) protein (275aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037F3DF7
Membrane protein {ECO:0000313|EMBL:AHY58513.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
17 kDa surface antigen
scnpilot_solids1_trim150_scaffold_393_curated_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39184..39414
DNA (231bp) protein (77aa)
Putative transmembrane protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTU0_PSEUU
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ADV27589.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_393_curated_27
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39418..40188
DNA (771bp) protein (257aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
DNAase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D777C4
DNAase {ECO:0000313|EMBL:AKC77715.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
scnpilot_solids1_trim150_scaffold_393_curated_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40231..41025)
DNA (795bp) protein (265aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029B1F8A
molybdopterin biosynthesis protein
Putative ThiF domain protein {ECO:0000313|EMBL:CAQ46654.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_393_curated_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41097..41528
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G7Z4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP12362.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_393_curated_30
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41638..42129
DNA (492bp) protein (164aa)
Peptidoglycan-associated outer membrane lipoprotein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4P4_9GAMM
Peptidoglycan-associated outer membrane lipoprotein {ECO:0000313|EMBL:EED37195.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
17 kDa surface antigen; K06077 outer membrane lipoprotein SlyB
Displaying items 1-30 of 91 in total

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