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scnpilot_solids1_trim150_scaffold_3340_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3340_curated_1
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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3..695
DNA (693bp) protein (231aa)
Extracellular solute-binding protein family 1 id=2123549 bin=GWB2_Chloroflexi_54_36 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
family 1 extracellular solute-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
Tax=GWB2_Chloroflexi_54_36_curated
scnpilot_solids1_trim150_scaffold_3340_curated_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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910..1947
DNA (1038bp) protein (346aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRN6_TRURR
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ADI13526.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_3340_curated_3
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(1944..6824)
DNA (4881bp) protein (1627aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2]
NAD-glutamate dehydrogenase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRN5_TRURR
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:ADI13525.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_3340_curated_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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6950..7531
DNA (582bp) protein (194aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Lipoprotein signal peptidase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRN4_TRURR
scnpilot_solids1_trim150_scaffold_3340_curated_5
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(7547..9160)
DNA (1614bp) protein (538aa)
NAD-binding domain 4 id=2262024 bin=GWB2_Chloroflexi_54_36 species=Capnocytophaga sp. oral taxon 324 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
scnpilot_solids1_trim150_scaffold_3340_curated_6
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(9157..10002)
DNA (846bp) protein (282aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Tr
Release factor glutamine methyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRN3_TRURR
scnpilot_solids1_trim150_scaffold_3340_curated_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10017..10607)
DNA (591bp) protein (197aa)
Single-stranded nucleic acid binding R3H domain protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRM0_TRURR
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:ADI13510.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_3340_curated_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10618..11412)
DNA (795bp) protein (265aa)
Membrane protein insertase YidC n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRL9_TRURR
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_3340_curated_9
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12107..12436)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037937A6
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
scnpilot_solids1_trim150_scaffold_3340_curated_10
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(12433..12789)
DNA (357bp) protein (119aa)
ribonuclease p protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VK
Ribonuclease P protein component n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4F3_OCEP5
scnpilot_solids1_trim150_scaffold_3340_curated_11
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(12795..12938)
DNA (144bp) protein (48aa)
50S ribosomal protein L34 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRL6_TRURR
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_3340_curated_12
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(13108..13851)
DNA (744bp) protein (248aa)
glutamyl-tRNA(gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRL5_TRURR
Displaying 12 items

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